Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR1287-201ENST00000408492 90 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 RNA5SP239-201ENST00000410218 129 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.83□□□□□ -1.96
COL2A1P02458 RPS15AP12-201ENST00000419498 388 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AC099336.2-201ENST00000422457 254 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.83□□□□□ -1.96
COL2A1P02458 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.83□□□□□ -1.96
COL2A1P02458 RPS24P8-201ENST00000431490 402 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.83□□□□□ -1.96
COL2A1P02458 AL035551.1-201ENST00000446931 348 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 RPS15AP17-201ENST00000470598 390 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 EIF4EP3-201ENST00000498782 656 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 RNU6-714P-201ENST00000516963 103 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.83□□□□□ -1.96
COL2A1P02458 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.83□□□□□ -1.96
COL2A1P02458 RANP3-201ENST00000530970 276 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AC021269.2-201ENST00000532318 330 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AP003034.1-201ENST00000534621 422 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.83□□□□□ -1.96
COL2A1P02458 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.83□□□□□ -1.96
COL2A1P02458 MIR5007-201ENST00000583098 95 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.83□□□□□ -1.96
COL2A1P02458 AP000942.3-201ENST00000603702 160 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AL359999.1-201ENST00000604513 294 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AL133215.3-201ENST00000609801 448 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COL2A1P02458 AC091953.2-201ENST00000623979 160 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.83□□□□□ -1.96
COL2A1P02458 MTND4LP32-201ENST00000636111 270 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 MTND5P42-201ENST00000637720 498 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
COL2A1P02458 AC069528.2-201ENST00000624849 1991 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.82□□□□□ -1.96
COL2A1P02458 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.82□□□□□ -1.96
COL2A1P02458 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.82□□□□□ -1.96
COL2A1P02458 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
COL2A1P02458 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.82□□□□□ -1.96
COL2A1P02458 RNU6-169P-201ENST00000365336 107 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 RNU6-744P-201ENST00000365557 107 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 Y_RNA.373-201ENST00000365600 103 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 RNU6-1316P-201ENST00000384242 108 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 TXNP7-201ENST00000406296 293 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 RPL31P52-201ENST00000407532 367 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 TPMTP2-201ENST00000414372 726 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC048351.1-201ENST00000420064 602 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 MTCYBP8-201ENST00000422855 651 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC006548.1-201ENST00000427470 102 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 OR51AB1P-201ENST00000429046 620 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 RPL36AP53-201ENST00000432891 316 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 HMGB3P10-201ENST00000434734 572 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC016691.1-201ENST00000441321 413 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC096638.1-201ENST00000444678 216 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AL645939.1-201ENST00000453429 797 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 PPP1R2P5-201ENST00000457256 603 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC027575.1-201ENST00000481064 460 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.82□□□□□ -1.96
COL2A1P02458 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.82□□□□□ -1.96
COL2A1P02458 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.82□□□□□ -1.96
COL2A1P02458 RNA5SP445-201ENST00000515889 115 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 RNU6-273P-201ENST00000516937 96 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.82□□□□□ -1.96
COL2A1P02458 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.82□□□□□ -1.96
COL2A1P02458 AC005668.1-201ENST00000571142 476 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.82□□□□□ -1.96
COL2A1P02458 AC008737.2-201ENST00000599446 118 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC004853.1-201ENST00000604902 698 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.82□□□□□ -1.96
COL2A1P02458 DISC2.1-201ENST00000612827 205 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC000123.2-201ENST00000623124 461 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 CR381572.1-201ENST00000625098 102 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.82□□□□□ -1.96
COL2A1P02458 MIR6733-201ENST00000635723 61 ntBASIC2.82□□□□□ -1.96
COL2A1P02458 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
COL2A1P02458 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
COL2A1P02458 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
COL2A1P02458 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL2A1P02458 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL2A1P02458 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.81□□□□□ -1.96
COL2A1P02458 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.81□□□□□ -1.96
COL2A1P02458 Y_RNA.796-201ENST00000364268 102 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 SNORA63C-201ENST00000364578 129 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 Y_RNA.259-201ENST00000364619 101 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 Y_RNA.799-201ENST00000364992 102 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 MIR506-201ENST00000384998 124 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 MIR559-201ENST00000385188 96 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
COL2A1P02458 RNU6-308P-201ENST00000390957 107 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 RN7SKP266-201ENST00000410232 287 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 SNRPEP10-201ENST00000420249 274 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 MTCO3P21-201ENST00000430791 643 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC119618.1-201ENST00000434191 222 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 IFNA20P-201ENST00000436840 528 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.81□□□□□ -1.96
COL2A1P02458 GAPDHP27-201ENST00000447427 1020 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.81□□□□□ -1.96
COL2A1P02458 AC083798.1-201ENST00000472671 131 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.81□□□□□ -1.96
COL2A1P02458 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms