Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MTCO3P8-201ENST00000453691 755 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.87□□□□□ -1.79
CNOT4O95628 SNORA84-201ENST00000459229 133 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 AL049830.2-201ENST00000480072 201 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 AC091167.1-201ENST00000492017 396 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.87□□□□□ -1.79
CNOT4O95628 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.87□□□□□ -1.79
CNOT4O95628 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
CNOT4O95628 CBX3P8-201ENST00000532412 525 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.87□□□□□ -1.79
CNOT4O95628 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.87□□□□□ -1.79
CNOT4O95628 AC034105.4-201ENST00000568304 277 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 RPL23AP97-201ENST00000568955 471 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 AC006600.1-201ENST00000572529 153 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 AC005951.2-201ENST00000576282 495 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 MIR4273-201ENST00000582824 84 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 AC141273.2-201ENST00000618989 130 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 AC007546.2-201ENST00000623996 360 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.87□□□□□ -1.79
CNOT4O95628 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNOT4O95628 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CNOT4O95628 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNOT4O95628 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNOT4O95628 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.87□□□□□ -1.79
CNOT4O95628 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CNOT4O95628 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CNOT4O95628 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNOT4O95628 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CNOT4O95628 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CNOT4O95628 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CNOT4O95628 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CNOT4O95628 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CNOT4O95628 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CNOT4O95628 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CNOT4O95628 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CNOT4O95628 Y_RNA.48-201ENST00000362710 103 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 Y_RNA.214-201ENST00000364201 112 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 RNA5SP366-201ENST00000365454 123 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.86□□□□□ -1.79
CNOT4O95628 Y_RNA.483-201ENST00000384380 101 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 Y_RNA.526-201ENST00000384572 110 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 Y_RNA.551-201ENST00000384661 102 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 MT-TW-201ENST00000387382 68 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 RNU4-61P-201ENST00000411243 107 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 CYCSP33-201ENST00000414485 327 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 UQCRHP4-201ENST00000471686 272 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 PARP4P3-201ENST00000510265 317 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.86□□□□□ -1.79
CNOT4O95628 AC010201.1-201ENST00000605051 540 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 AL021997.2-201ENST00000615674 271 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 MIR6076-201ENST00000617521 113 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 SNORD39.4-201ENST00000620099 78 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 U6.104-201ENST00000637979 90 ntBASIC3.86□□□□□ -1.79
CNOT4O95628 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CNOT4O95628 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CNOT4O95628 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CNOT4O95628 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CNOT4O95628 FAM35BP-202ENST00000497389 3337 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CNOT4O95628 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNOT4O95628 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CNOT4O95628 OR56A5-201ENST00000340110 738 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RNY3P11-201ENST00000364153 102 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RNA5SP175-201ENST00000364275 119 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RNA5SP22-201ENST00000365393 109 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RNA5SP151-201ENST00000365632 117 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 MIR625-201ENST00000385047 85 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RNU6-1197P-201ENST00000391183 107 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RNU6-325P-201ENST00000411132 105 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 AL353621.1-201ENST00000418219 243 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 ELOCP20-201ENST00000422460 345 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.85□□□□□ -1.79
CNOT4O95628 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.85□□□□□ -1.79
CNOT4O95628 RPL30P14-201ENST00000482744 348 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RPS15AP34-201ENST00000487776 387 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.85□□□□□ -1.79
CNOT4O95628 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.85□□□□□ -1.79
CNOT4O95628 AC008716.1-201ENST00000511084 513 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 AC113155.1-201ENST00000511141 769 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 SNORA25.11-201ENST00000515935 105 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RNU6-711P-201ENST00000517255 106 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CNOT4O95628 HSPE1P20-201ENST00000538133 289 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.85□□□□□ -1.79
CNOT4O95628 AC025884.1-201ENST00000556034 378 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.85□□□□□ -1.79
CNOT4O95628 MIR3128-201ENST00000581957 66 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.85□□□□□ -1.79
CNOT4O95628 VN1R91P-201ENST00000594377 169 ntBASIC3.85□□□□□ -1.79
CNOT4O95628 RAC1P9-201ENST00000604990 392 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms