Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC027575.1-201ENST00000481064 460 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB3O75112 AC108078.2-201ENST00000510750 236 ntBASIC3.06□□□□□ -1.92
LDB3O75112 SNORA31.3-201ENST00000516029 96 ntBASIC3.06□□□□□ -1.92
LDB3O75112 RNU6-559P-201ENST00000516151 98 ntBASIC3.06□□□□□ -1.92
LDB3O75112 SCARNA15.2-201ENST00000516409 127 ntBASIC3.06□□□□□ -1.92
LDB3O75112 Y_RNA.718-201ENST00000517110 102 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB3O75112 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.06□□□□□ -1.92
LDB3O75112 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LDB3O75112 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB3O75112 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB3O75112 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.06□□□□□ -1.92
LDB3O75112 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.06□□□□□ -1.92
LDB3O75112 APOOP1-201ENST00000604695 592 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AC124303.1-201ENST00000605703 360 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AL157817.1-201ENST00000614264 790 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AC002076.2-201ENST00000617362 122 ntBASIC3.06□□□□□ -1.92
LDB3O75112 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.06□□□□□ -1.92
LDB3O75112 OR4G2P-202ENST00000641004 1759 ntBASIC3.06□□□□□ -1.92
LDB3O75112 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB3O75112 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LDB3O75112 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.05□□□□□ -1.92
LDB3O75112 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LDB3O75112 AC093010.3-201ENST00000570269 15214 ntBASIC3.05□□□□□ -1.92
LDB3O75112 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.05□□□□□ -1.92
LDB3O75112 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB3O75112 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LDB3O75112 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB3O75112 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LDB3O75112 Y_RNA.31-201ENST00000362574 102 ntBASIC3.05□□□□□ -1.92
LDB3O75112 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LDB3O75112 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB3O75112 Y_RNA.384-201ENST00000383909 102 ntBASIC3.05□□□□□ -1.92
LDB3O75112 Y_RNA.431-201ENST00000384086 102 ntBASIC3.05□□□□□ -1.92
LDB3O75112 RNU6-738P-201ENST00000384531 106 ntBASIC3.05□□□□□ -1.92
LDB3O75112 MIR606-201ENST00000384851 96 ntBASIC3.05□□□□□ -1.92
LDB3O75112 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LDB3O75112 MIR548P-201ENST00000408336 84 ntBASIC3.05□□□□□ -1.92
LDB3O75112 RNU2-29P-201ENST00000410423 189 ntBASIC3.05□□□□□ -1.92
LDB3O75112 RNA5SP229-201ENST00000410809 99 ntBASIC3.05□□□□□ -1.92
LDB3O75112 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB3O75112 AL158156.1-201ENST00000422509 473 ntBASIC3.05□□□□□ -1.92
LDB3O75112 NDUFB4P7-201ENST00000423198 363 ntBASIC3.05□□□□□ -1.92
LDB3O75112 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB3O75112 HMGB1P27-201ENST00000431429 603 ntBASIC3.05□□□□□ -1.92
LDB3O75112 NDUFB4P6-201ENST00000436819 366 ntBASIC3.05□□□□□ -1.92
LDB3O75112 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB3O75112 Z75741.1-201ENST00000446793 314 ntBASIC3.05□□□□□ -1.92
LDB3O75112 HMGN1P18-201ENST00000457642 277 ntBASIC3.05□□□□□ -1.92
LDB3O75112 RNU6-953P-201ENST00000459154 107 ntBASIC3.05□□□□□ -1.92
LDB3O75112 RNU6-1208P-201ENST00000459588 107 ntBASIC3.05□□□□□ -1.92
LDB3O75112 RN7SL601P-201ENST00000471221 293 ntBASIC3.05□□□□□ -1.92
LDB3O75112 TRBVA-201ENST00000498804 316 ntBASIC3.05□□□□□ -1.92
LDB3O75112 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB3O75112 RNU6-927P-201ENST00000516199 100 ntBASIC3.05□□□□□ -1.92
LDB3O75112 SNORA25.17-201ENST00000517184 124 ntBASIC3.05□□□□□ -1.92
LDB3O75112 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.05□□□□□ -1.92
LDB3O75112 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB3O75112 MIR3944-201ENST00000581277 108 ntBASIC3.05□□□□□ -1.92
LDB3O75112 BNIP3P22-201ENST00000593399 556 ntBASIC3.05□□□□□ -1.92
LDB3O75112 SNRPGP17-201ENST00000603780 214 ntBASIC3.05□□□□□ -1.92
LDB3O75112 AC073657.2-201ENST00000605661 303 ntBASIC3.05□□□□□ -1.92
LDB3O75112 AC008962.1-201ENST00000605729 304 ntBASIC3.05□□□□□ -1.92
LDB3O75112 AC007619.2-201ENST00000605743 379 ntBASIC3.05□□□□□ -1.92
LDB3O75112 Z82243.1-201ENST00000609432 473 ntBASIC3.05□□□□□ -1.92
LDB3O75112 AC134503.1-201ENST00000633048 54 ntBASIC3.05□□□□□ -1.92
LDB3O75112 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
LDB3O75112 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LDB3O75112 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
LDB3O75112 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.05□□□□□ -1.92
LDB3O75112 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB3O75112 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LDB3O75112 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.04□□□□□ -1.92
LDB3O75112 RNU6-14P-201ENST00000384630 106 ntBASIC3.04□□□□□ -1.92
LDB3O75112 MIR591-201ENST00000385290 95 ntBASIC3.04□□□□□ -1.92
LDB3O75112 RNU6-308P-201ENST00000390957 107 ntBASIC3.04□□□□□ -1.92
LDB3O75112 RNU6-817P-201ENST00000391083 104 ntBASIC3.04□□□□□ -1.92
LDB3O75112 MIR548K-201ENST00000408406 116 ntBASIC3.04□□□□□ -1.92
LDB3O75112 RNA5SP120-201ENST00000410900 112 ntBASIC3.04□□□□□ -1.92
LDB3O75112 VN1R36P-201ENST00000414936 291 ntBASIC3.04□□□□□ -1.92
LDB3O75112 AC245054.2-201ENST00000415639 319 ntBASIC3.04□□□□□ -1.92
LDB3O75112 RPL7P46-201ENST00000425129 740 ntBASIC3.04□□□□□ -1.92
LDB3O75112 Z82205.1-201ENST00000428456 297 ntBASIC3.04□□□□□ -1.92
LDB3O75112 CALM2P2-201ENST00000428512 440 ntBASIC3.04□□□□□ -1.92
LDB3O75112 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.04□□□□□ -1.92
LDB3O75112 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
LDB3O75112 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.04□□□□□ -1.92
LDB3O75112 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB3O75112 AL136097.1-201ENST00000456945 913 ntBASIC3.04□□□□□ -1.92
LDB3O75112 SNRPFP3-201ENST00000457792 225 ntBASIC3.04□□□□□ -1.92
LDB3O75112 Y_RNA.639-201ENST00000458981 102 ntBASIC3.04□□□□□ -1.92
LDB3O75112 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB3O75112 RPL31P60-201ENST00000478450 367 ntBASIC3.04□□□□□ -1.92
LDB3O75112 RPS4XP22-201ENST00000480755 780 ntBASIC3.04□□□□□ -1.92
LDB3O75112 RPL32P34-201ENST00000486380 400 ntBASIC3.04□□□□□ -1.92
LDB3O75112 MTND5P5-201ENST00000503764 376 ntBASIC3.04□□□□□ -1.92
LDB3O75112 AC104806.1-201ENST00000508720 308 ntBASIC3.04□□□□□ -1.92
LDB3O75112 AC098591.2-201ENST00000510152 315 ntBASIC3.04□□□□□ -1.92
LDB3O75112 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms