Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 TRBV1-201ENST00000476502 284 ntBASIC2.42□□□□□ -2.02
SDC3O75056 GZMAP1-201ENST00000503054 631 ntBASIC2.42□□□□□ -2.02
SDC3O75056 BTF3P12-201ENST00000519620 469 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.42□□□□□ -2.02
SDC3O75056 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.42□□□□□ -2.02
SDC3O75056 AC084851.1-201ENST00000529105 249 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AC021269.2-201ENST00000532318 330 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.42□□□□□ -2.02
SDC3O75056 AC021739.1-201ENST00000559631 174 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.42□□□□□ -2.02
SDC3O75056 MIR3167-201ENST00000579623 85 ntBASIC2.42□□□□□ -2.02
SDC3O75056 MIR3682-201ENST00000581338 84 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AC025811.1-201ENST00000604312 472 ntBASIC2.42□□□□□ -2.02
SDC3O75056 AC011939.3-201ENST00000613686 466 ntBASIC2.42□□□□□ -2.02
SDC3O75056 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.42□□□□□ -2.02
SDC3O75056 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.42□□□□□ -2.02
SDC3O75056 AC010329.5-201ENST00000623497 2174 ntBASIC2.42□□□□□ -2.02
SDC3O75056 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.41□□□□□ -2.02
SDC3O75056 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SDC3O75056 MTND4P27-201ENST00000450813 1354 ntBASIC2.41□□□□□ -2.02
SDC3O75056 NACAP2-201ENST00000318548 624 ntBASIC2.41□□□□□ -2.02
SDC3O75056 U8.3-201ENST00000363321 132 ntBASIC2.41□□□□□ -2.02
SDC3O75056 RNU6-288P-201ENST00000363690 104 ntBASIC2.41□□□□□ -2.02
SDC3O75056 RPS3AP36-201ENST00000398190 775 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AL359511.1-201ENST00000402970 211 ntBASIC2.41□□□□□ -2.02
SDC3O75056 RNU6-1328P-201ENST00000410938 106 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AC007283.2-201ENST00000424739 197 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AC093106.2-201ENST00000428212 385 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AL592045.1-201ENST00000429867 352 ntBASIC2.41□□□□□ -2.02
SDC3O75056 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC3O75056 AL353705.4-201ENST00000449661 238 ntBASIC2.41□□□□□ -2.02
SDC3O75056 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SDC3O75056 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC3O75056 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.41□□□□□ -2.02
SDC3O75056 AL033528.1-201ENST00000453780 140 ntBASIC2.41□□□□□ -2.02
SDC3O75056 SNRPGP9-201ENST00000456025 225 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AC139453.3-201ENST00000493276 369 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AC008716.1-201ENST00000511084 513 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC3O75056 RNU6-143P-201ENST00000516942 93 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC3O75056 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.41□□□□□ -2.02
SDC3O75056 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.41□□□□□ -2.02
SDC3O75056 AC005261.5-201ENST00000596280 355 ntBASIC2.41□□□□□ -2.02
SDC3O75056 AP001506.1-201ENST00000615444 211 ntBASIC2.41□□□□□ -2.02
SDC3O75056 MIR7843-201ENST00000622274 79 ntBASIC2.41□□□□□ -2.02
SDC3O75056 PISRT1-201ENST00000626175 531 ntBASIC2.41□□□□□ -2.02
SDC3O75056 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
SDC3O75056 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.41□□□□□ -2.02
SDC3O75056 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.4□□□□□ -2.02
SDC3O75056 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SDC3O75056 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
SDC3O75056 ZNF271P-202ENST00000465539 1970 ntBASIC2.4□□□□□ -2.02
SDC3O75056 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
SDC3O75056 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC3O75056 RNU6-39P-201ENST00000384344 107 ntBASIC2.4□□□□□ -2.03
SDC3O75056 RNU6-1072P-201ENST00000384703 107 ntBASIC2.4□□□□□ -2.03
SDC3O75056 RNY3P10-201ENST00000384764 102 ntBASIC2.4□□□□□ -2.03
SDC3O75056 RNU6-443P-201ENST00000384780 107 ntBASIC2.4□□□□□ -2.03
SDC3O75056 MIR558-201ENST00000384920 94 ntBASIC2.4□□□□□ -2.03
SDC3O75056 MIR301A-201ENST00000385261 86 ntBASIC2.4□□□□□ -2.03
SDC3O75056 SNORA40.3-201ENST00000390964 122 ntBASIC2.4□□□□□ -2.03
SDC3O75056 RNA5SP425-201ENST00000410336 112 ntBASIC2.4□□□□□ -2.03
SDC3O75056 ELOCP4-201ENST00000420090 333 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AL109913.1-201ENST00000421173 514 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC3O75056 MED13P1-201ENST00000428342 171 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC3O75056 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC3O75056 AL591212.2-201ENST00000433923 257 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC009961.2-201ENST00000435771 251 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.4□□□□□ -2.03
SDC3O75056 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC3O75056 RPS24P1-201ENST00000438550 371 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.4□□□□□ -2.03
SDC3O75056 BRK1P2-201ENST00000442875 223 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC3O75056 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.4□□□□□ -2.03
SDC3O75056 AC073901.1-201ENST00000462471 408 ntBASIC2.4□□□□□ -2.03
SDC3O75056 RPL37P25-201ENST00000507308 276 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC3O75056 AC022616.3-201ENST00000523940 148 ntBASIC2.4□□□□□ -2.03
SDC3O75056 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SDC3O75056 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC3O75056 MIR3199-1-201ENST00000582434 88 ntBASIC2.4□□□□□ -2.03
SDC3O75056 MIR5194-201ENST00000582634 120 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC005771.1-201ENST00000585581 349 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC060766.3-201ENST00000591442 263 ntBASIC2.4□□□□□ -2.03
SDC3O75056 Z99497.2-201ENST00000603634 310 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC022893.3-201ENST00000607665 437 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AC046143.2-201ENST00000609789 160 ntBASIC2.4□□□□□ -2.03
SDC3O75056 AL589743.7-201ENST00000612637 233 ntBASIC2.4□□□□□ -2.03
SDC3O75056 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.4□□□□□ -2.03
SDC3O75056 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.4□□□□□ -2.03
SDC3O75056 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.4□□□□□ -2.03
SDC3O75056 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SDC3O75056 FARSBP1-201ENST00000435808 1778 ntBASIC2.39□□□□□ -2.03
SDC3O75056 U3.4-201ENST00000363352 213 ntBASIC2.39□□□□□ -2.03
SDC3O75056 RNY3P9-201ENST00000384727 106 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 294 ms