Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
SMARCA5O60264 AC073539.2-201ENST00000597113 165 ntBASIC4.54□□□□□ -1.68
SMARCA5O60264 AC011373.1-201ENST00000607270 237 ntBASIC4.54□□□□□ -1.68
SMARCA5O60264 AL512643.1-201ENST00000635735 524 ntBASIC4.54□□□□□ -1.68
SMARCA5O60264 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMARCA5O60264 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMARCA5O60264 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMARCA5O60264 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.53□□□□□ -1.68
SMARCA5O60264 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMARCA5O60264 RNA5SP51-201ENST00000364750 119 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 Y_RNA.401-201ENST00000383965 117 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 RNU6-985P-201ENST00000410182 104 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 AC068533.1-201ENST00000418542 415 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 ARL5AP1-201ENST00000418991 388 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.53□□□□□ -1.68
SMARCA5O60264 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.53□□□□□ -1.68
SMARCA5O60264 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.53□□□□□ -1.68
SMARCA5O60264 AC010099.1-201ENST00000455434 375 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.53□□□□□ -1.68
SMARCA5O60264 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.53□□□□□ -1.68
SMARCA5O60264 RPL21P93-201ENST00000480465 489 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.53□□□□□ -1.68
SMARCA5O60264 MTCO2P24-201ENST00000515611 426 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 RNU6-123P-201ENST00000516163 102 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 RNU6-256P-201ENST00000516747 97 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 RN7SKP209-201ENST00000516888 304 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 RNA5SP165-201ENST00000517142 115 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMARCA5O60264 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.53□□□□□ -1.68
SMARCA5O60264 MIR5187-201ENST00000583479 76 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 AC008521.1-201ENST00000587471 187 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.53□□□□□ -1.68
SMARCA5O60264 MIR15A-201ENST00000607334 83 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 AC004852.3-201ENST00000614131 326 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 Z99571.1-201ENST00000636677 394 ntBASIC4.53□□□□□ -1.68
SMARCA5O60264 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMARCA5O60264 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SMARCA5O60264 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMARCA5O60264 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMARCA5O60264 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.53□□□□□ -1.68
SMARCA5O60264 AC121333.1-201ENST00000567488 2709 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.52□□□□□ -1.69
SMARCA5O60264 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMARCA5O60264 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMARCA5O60264 RNU6-270P-201ENST00000364131 105 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 SNORA14A-201ENST00000364773 135 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMARCA5O60264 Y_RNA.576-201ENST00000384781 102 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 RN7SKP58-201ENST00000411010 305 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 DBIP2-201ENST00000419076 262 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 AC099548.1-201ENST00000421443 426 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 HIGD1AP11-201ENST00000438361 280 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 AP002884.2-201ENST00000471647 395 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 HMGB1P30-201ENST00000492455 606 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 AC104806.1-201ENST00000508720 308 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 AC108043.1-201ENST00000512696 574 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 SNORA70.18-201ENST00000516696 98 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 RNU6-1315P-201ENST00000517187 99 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 AC084851.1-201ENST00000529105 249 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.52□□□□□ -1.69
SMARCA5O60264 AC004817.2-201ENST00000561794 651 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 MIR1273C-201ENST00000578669 77 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.52□□□□□ -1.69
SMARCA5O60264 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.52□□□□□ -1.69
SMARCA5O60264 AL138889.2-201ENST00000603883 242 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 AL158032.1-201ENST00000605401 106 ntBASIC4.52□□□□□ -1.69
SMARCA5O60264 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.52□□□□□ -1.69
SMARCA5O60264 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMARCA5O60264 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMARCA5O60264 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SMARCA5O60264 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SMARCA5O60264 MTND5P10-201ENST00000603719 1809 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SMARCA5O60264 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMARCA5O60264 RNU6-1115P-201ENST00000362490 106 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 SNORD113-7-201ENST00000363762 77 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 RNU6-310P-201ENST00000384655 107 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.51□□□□□ -1.69
SMARCA5O60264 RNU4-46P-201ENST00000410818 138 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 NDUFS5P4-201ENST00000412983 318 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 AC092809.3-201ENST00000415453 231 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.51□□□□□ -1.69
SMARCA5O60264 HMGN2P30-201ENST00000423237 256 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 HMGB1P9-201ENST00000429856 646 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.51□□□□□ -1.69
SMARCA5O60264 AL731563.1-201ENST00000442202 214 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 NOTCH2P1-201ENST00000443481 624 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.51□□□□□ -1.69
SMARCA5O60264 snoU13.28-201ENST00000459235 104 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 AC004801.2-202ENST00000463559 283 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.51□□□□□ -1.69
SMARCA5O60264 RN7SL132P-201ENST00000478131 296 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 RPS27P27-201ENST00000498779 255 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 RNU6-794P-201ENST00000517261 64 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.51□□□□□ -1.69
SMARCA5O60264 AL121576.1-201ENST00000556055 276 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 AC008269.2-201ENST00000561915 1105 ntBASIC4.51□□□□□ -1.69
SMARCA5O60264 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.51□□□□□ -1.69
SMARCA5O60264 KLKP1-201ENST00000595979 403 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms