Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC007919.1-201ENST00000429380 217 ntBASIC2.43□□□□□ -2.02
CDX4O14627 HMGB1P27-201ENST00000431429 603 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX4O14627 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX4O14627 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDX4O14627 RPL23AP58-201ENST00000440453 469 ntBASIC2.43□□□□□ -2.02
CDX4O14627 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX4O14627 AC010099.1-201ENST00000455434 375 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC087588.1-201ENST00000462203 316 ntBASIC2.43□□□□□ -2.02
CDX4O14627 RBM43P1-201ENST00000476891 1081 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AL160314.1-201ENST00000490836 438 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.43□□□□□ -2.02
CDX4O14627 AC011352.1-201ENST00000512300 793 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC114797.1-201ENST00000514003 728 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX4O14627 SNORA9.3-201ENST00000516383 129 ntBASIC2.43□□□□□ -2.02
CDX4O14627 RN7SKP258-201ENST00000517151 304 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX4O14627 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX4O14627 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.43□□□□□ -2.02
CDX4O14627 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX4O14627 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX4O14627 AL391840.1-201ENST00000571144 367 ntBASIC2.43□□□□□ -2.02
CDX4O14627 DUXAP4-201ENST00000603046 613 ntBASIC2.43□□□□□ -2.02
CDX4O14627 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX4O14627 AL161734.1-201ENST00000609720 557 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AL133173.2-201ENST00000614270 90 ntBASIC2.43□□□□□ -2.02
CDX4O14627 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CDX4O14627 AC006338.1-201ENST00000618453 749 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC136475.10-201ENST00000620253 385 ntBASIC2.43□□□□□ -2.02
CDX4O14627 AC124864.2-201ENST00000624736 186 ntBASIC2.43□□□□□ -2.02
CDX4O14627 MIR6863-201ENST00000636112 90 ntBASIC2.43□□□□□ -2.02
CDX4O14627 LRRC77P-213ENST00000637727 880 ntBASIC2.43□□□□□ -2.02
CDX4O14627 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDX4O14627 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.42□□□□□ -2.02
CDX4O14627 AC091564.4-201ENST00000533934 2194 ntBASIC2.42□□□□□ -2.02
CDX4O14627 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.42□□□□□ -2.02
CDX4O14627 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDX4O14627 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDX4O14627 RNU5E-1-201ENST00000362477 120 ntBASIC2.42□□□□□ -2.02
CDX4O14627 RNU6-1035P-201ENST00000384477 107 ntBASIC2.42□□□□□ -2.02
CDX4O14627 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CDX4O14627 GSTA9P-201ENST00000406231 611 ntBASIC2.42□□□□□ -2.02
CDX4O14627 RNA5SP247-201ENST00000411181 105 ntBASIC2.42□□□□□ -2.02
CDX4O14627 MTND1P23-201ENST00000416931 372 ntBASIC2.42□□□□□ -2.02
CDX4O14627 ATG3P1-201ENST00000419507 911 ntBASIC2.42□□□□□ -2.02
CDX4O14627 EIF1P1-201ENST00000421436 341 ntBASIC2.42□□□□□ -2.02
CDX4O14627 MTCYBP5-201ENST00000423752 1135 ntBASIC2.42□□□□□ -2.02
CDX4O14627 RAC1P6-201ENST00000423911 575 ntBASIC2.42□□□□□ -2.02
CDX4O14627 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX4O14627 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX4O14627 RPS12P2-201ENST00000439728 269 ntBASIC2.42□□□□□ -2.02
CDX4O14627 PIGFP3-201ENST00000441918 722 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AC096638.1-201ENST00000444678 216 ntBASIC2.42□□□□□ -2.02
CDX4O14627 GAPDHP27-201ENST00000447427 1020 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX4O14627 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX4O14627 AC010587.1-201ENST00000505809 469 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AC108078.1-201ENST00000508073 725 ntBASIC2.42□□□□□ -2.02
CDX4O14627 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX4O14627 RAC1P5-201ENST00000512182 576 ntBASIC2.42□□□□□ -2.02
CDX4O14627 RNU6-718P-201ENST00000516166 105 ntBASIC2.42□□□□□ -2.02
CDX4O14627 SNORA31.26-201ENST00000517250 137 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX4O14627 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX4O14627 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
CDX4O14627 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.42□□□□□ -2.02
CDX4O14627 AMZ2P1-203ENST00000565833 850 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AC092954.2-201ENST00000609103 430 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AC046143.2-201ENST00000609789 160 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX4O14627 AC004696.1-201ENST00000614345 607 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AL353997.5-201ENST00000618886 171 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AC073308.1-201ENST00000623696 305 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AL157786.1-207ENST00000627771 695 ntBASIC2.42□□□□□ -2.02
CDX4O14627 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX4O14627 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.42□□□□□ -2.02
CDX4O14627 AL137003.2-201ENST00000606924 2538 ntBASIC2.42□□□□□ -2.02
CDX4O14627 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDX4O14627 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CDX4O14627 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
CDX4O14627 OR4G2P-201ENST00000328113 903 ntBASIC2.41□□□□□ -2.02
CDX4O14627 RNU4-1-201ENST00000363925 141 ntBASIC2.41□□□□□ -2.02
CDX4O14627 RNY1P12-201ENST00000364251 105 ntBASIC2.41□□□□□ -2.02
CDX4O14627 RNU6-282P-201ENST00000365357 103 ntBASIC2.41□□□□□ -2.02
CDX4O14627 MIR325-201ENST00000385260 98 ntBASIC2.41□□□□□ -2.02
CDX4O14627 RPL23AP32-201ENST00000395315 459 ntBASIC2.41□□□□□ -2.02
CDX4O14627 AL512633.1-201ENST00000399931 655 ntBASIC2.41□□□□□ -2.02
CDX4O14627 ZNF90P2-204ENST00000419323 1075 ntBASIC2.41□□□□□ -2.02
CDX4O14627 PIGFP2-201ENST00000421400 651 ntBASIC2.41□□□□□ -2.02
CDX4O14627 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX4O14627 AC007283.2-201ENST00000424739 197 ntBASIC2.41□□□□□ -2.02
CDX4O14627 SAR1AP4-201ENST00000429225 591 ntBASIC2.41□□□□□ -2.02
CDX4O14627 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.41□□□□□ -2.02
CDX4O14627 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX4O14627 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.41□□□□□ -2.02
CDX4O14627 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX4O14627 C1DP4-201ENST00000455429 424 ntBASIC2.41□□□□□ -2.02
CDX4O14627 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms