Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC080013.2-201ENST00000460866 323 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 AP001324.2-201ENST00000461163 319 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 AC104563.1-201ENST00000476147 376 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 AC005840.1-201ENST00000498412 377 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UBFD1O14562 AC113347.3-201ENST00000509113 148 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
UBFD1O14562 AC087441.2-201ENST00000529141 262 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 AC022880.1-201ENST00000534017 973 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 AL133241.1-201ENST00000556832 487 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.46□□□□□ -2.18
UBFD1O14562 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.46□□□□□ -2.18
UBFD1O14562 AC105245.1-201ENST00000581934 244 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UBFD1O14562 AC104763.3-201ENST00000613765 618 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 AC009233.1-201ENST00000616477 371 ntBASIC1.46□□□□□ -2.18
UBFD1O14562 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
UBFD1O14562 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBFD1O14562 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBFD1O14562 U6atac.2-201ENST00000408644 118 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 RNU2-68P-201ENST00000410878 191 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.45□□□□□ -2.18
UBFD1O14562 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBFD1O14562 SNRPFP4-201ENST00000456366 242 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AC013267.1-201ENST00000458227 267 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.45□□□□□ -2.18
UBFD1O14562 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.45□□□□□ -2.18
UBFD1O14562 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.45□□□□□ -2.18
UBFD1O14562 AF213884.2-201ENST00000510417 903 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 RNU6-581P-201ENST00000516214 105 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 MIR892C-201ENST00000516410 77 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 RNU6-703P-201ENST00000516946 107 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.45□□□□□ -2.18
UBFD1O14562 AC092451.2-201ENST00000538746 658 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 NACAP3-201ENST00000552100 481 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 RPS3AP4-201ENST00000555161 764 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AL121821.2-201ENST00000556081 394 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AL133153.1-201ENST00000557756 303 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AC090186.1-201ENST00000605991 572 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 DUSP12P1-201ENST00000612874 516 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AL109620.1-201ENST00000618738 1197 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AC024581.2-201ENST00000619986 252 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AC112204.3-201ENST00000623822 332 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 AC091953.2-201ENST00000623979 160 ntBASIC1.45□□□□□ -2.18
UBFD1O14562 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.45□□□□□ -2.18
UBFD1O14562 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
UBFD1O14562 RNU6-223P-201ENST00000362830 107 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 RNU1-72P-201ENST00000362976 153 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 U8.3-201ENST00000363321 132 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 RNU6-853P-201ENST00000364306 107 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 Y_RNA.508-201ENST00000384502 114 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 RNU6-658P-201ENST00000384606 106 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 MIR1284-201ENST00000408337 120 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 RN7SKP158-201ENST00000410453 326 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 RPL21P24-201ENST00000413752 448 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 RPL26P27-201ENST00000414397 437 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.44□□□□□ -2.18
UBFD1O14562 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.44□□□□□ -2.18
UBFD1O14562 Z82205.1-201ENST00000428456 297 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.44□□□□□ -2.18
UBFD1O14562 FABP5P15-201ENST00000453566 214 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.44□□□□□ -2.18
UBFD1O14562 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 AC008526.1-201ENST00000509149 338 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 AC096745.1-201ENST00000509945 370 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 AC024589.1-201ENST00000512207 263 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 SMURF2P1-201ENST00000514992 481 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.44□□□□□ -2.18
UBFD1O14562 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.44□□□□□ -2.18
UBFD1O14562 AC005034.5-201ENST00000604219 466 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 AC131235.4-201ENST00000609288 620 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 MIR8070-201ENST00000616510 88 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 AP002791.1-201ENST00000623291 381 ntBASIC1.44□□□□□ -2.18
UBFD1O14562 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.44□□□□□ -2.18
UBFD1O14562 RNU4-13P-201ENST00000364019 141 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
UBFD1O14562 AL512604.1-201ENST00000404812 257 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.43□□□□□ -2.18
UBFD1O14562 GPM6BP2-201ENST00000432046 144 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 RPL36AP53-201ENST00000432891 316 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 NANOGP2-201ENST00000435391 727 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.43□□□□□ -2.18
UBFD1O14562 GPM6BP1-201ENST00000446387 144 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.43□□□□□ -2.18
UBFD1O14562 AP000542.1-201ENST00000448473 371 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC009474.2-201ENST00000451383 136 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 OR6C5P-201ENST00000452388 923 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.43□□□□□ -2.18
UBFD1O14562 AC005410.1-202ENST00000460347 485 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC011005.2-201ENST00000487324 359 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC026801.1-201ENST00000497178 464 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.43□□□□□ -2.18
UBFD1O14562 AC093809.1-201ENST00000509155 340 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 AC110760.3-202ENST00000515177 371 ntBASIC1.43□□□□□ -2.18
UBFD1O14562 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms