Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SOX1O00570 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX1O00570 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SOX1O00570 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX1O00570 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX1O00570 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
SOX1O00570 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX1O00570 Y_RNA.16-201ENST00000362421 102 ntBASIC4.59□□□□□ -1.67
SOX1O00570 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.59□□□□□ -1.67
SOX1O00570 MIR30B-201ENST00000384850 88 ntBASIC4.59□□□□□ -1.67
SOX1O00570 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SOX1O00570 Y_RNA.581-201ENST00000391017 97 ntBASIC4.59□□□□□ -1.67
SOX1O00570 PCNPP3-201ENST00000393579 471 ntBASIC4.59□□□□□ -1.67
SOX1O00570 RN7SKP16-201ENST00000410180 299 ntBASIC4.59□□□□□ -1.67
SOX1O00570 PIGFP3-201ENST00000441918 722 ntBASIC4.59□□□□□ -1.67
SOX1O00570 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX1O00570 RPS29P27-201ENST00000463711 170 ntBASIC4.59□□□□□ -1.67
SOX1O00570 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX1O00570 Y_RNA.706-201ENST00000516933 99 ntBASIC4.59□□□□□ -1.67
SOX1O00570 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX1O00570 ATP5F1P5-201ENST00000526403 760 ntBASIC4.59□□□□□ -1.67
SOX1O00570 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX1O00570 FAM60BP-201ENST00000578364 658 ntBASIC4.59□□□□□ -1.67
SOX1O00570 MIR4660-201ENST00000583549 74 ntBASIC4.59□□□□□ -1.67
SOX1O00570 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.59□□□□□ -1.68
SOX1O00570 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SOX1O00570 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SOX1O00570 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 AL139811.1-201ENST00000424779 2299 ntBASIC4.58□□□□□ -1.68
SOX1O00570 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SOX1O00570 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SOX1O00570 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SOX1O00570 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 RNU6-227P-201ENST00000362865 103 ntBASIC4.58□□□□□ -1.68
SOX1O00570 MIR10A-201ENST00000385043 110 ntBASIC4.58□□□□□ -1.68
SOX1O00570 RPL21P17-201ENST00000397467 475 ntBASIC4.58□□□□□ -1.68
SOX1O00570 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 HMGN2P27-201ENST00000427352 270 ntBASIC4.58□□□□□ -1.68
SOX1O00570 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.58□□□□□ -1.68
SOX1O00570 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.58□□□□□ -1.68
SOX1O00570 AL160314.1-201ENST00000490836 438 ntBASIC4.58□□□□□ -1.68
SOX1O00570 AC108145.1-201ENST00000503770 153 ntBASIC4.58□□□□□ -1.68
SOX1O00570 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.58□□□□□ -1.68
SOX1O00570 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.58□□□□□ -1.68
SOX1O00570 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.58□□□□□ -1.68
SOX1O00570 CASP1P1-201ENST00000526345 212 ntBASIC4.58□□□□□ -1.68
SOX1O00570 AC107918.3-201ENST00000533272 382 ntBASIC4.58□□□□□ -1.68
SOX1O00570 AC005476.1-201ENST00000554427 397 ntBASIC4.58□□□□□ -1.68
SOX1O00570 RPL23AP78-201ENST00000599928 470 ntBASIC4.58□□□□□ -1.68
SOX1O00570 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 AC005046.1-201ENST00000608515 625 ntBASIC4.58□□□□□ -1.68
SOX1O00570 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SOX1O00570 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SOX1O00570 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.58□□□□□ -1.68
SOX1O00570 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.58□□□□□ -1.68
SOX1O00570 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SOX1O00570 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SOX1O00570 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
SOX1O00570 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SOX1O00570 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SOX1O00570 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SOX1O00570 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SOX1O00570 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SOX1O00570 Y_RNA.541-201ENST00000384640 113 ntBASIC4.57□□□□□ -1.68
SOX1O00570 MIR548I2-201ENST00000408348 149 ntBASIC4.57□□□□□ -1.68
SOX1O00570 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.57□□□□□ -1.68
SOX1O00570 RPS20P22-201ENST00000473700 357 ntBASIC4.57□□□□□ -1.68
SOX1O00570 ANXA2P1-201ENST00000505539 926 ntBASIC4.57□□□□□ -1.68
SOX1O00570 MLLT10P2-201ENST00000506434 249 ntBASIC4.57□□□□□ -1.68
SOX1O00570 AL592156.1-201ENST00000508758 304 ntBASIC4.57□□□□□ -1.68
SOX1O00570 RNU6-377P-201ENST00000515965 102 ntBASIC4.57□□□□□ -1.68
SOX1O00570 SCARNA24.2-201ENST00000516968 130 ntBASIC4.57□□□□□ -1.68
SOX1O00570 RNU6-1212P-201ENST00000517023 104 ntBASIC4.57□□□□□ -1.68
SOX1O00570 AC025755.1-201ENST00000521306 278 ntBASIC4.57□□□□□ -1.68
SOX1O00570 AC010186.2-204ENST00000537668 439 ntBASIC4.57□□□□□ -1.68
SOX1O00570 U3.45-201ENST00000607547 219 ntBASIC4.57□□□□□ -1.68
SOX1O00570 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.57□□□□□ -1.68
SOX1O00570 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.57□□□□□ -1.68
SOX1O00570 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.57□□□□□ -1.68
SOX1O00570 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX1O00570 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SOX1O00570 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SOX1O00570 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX1O00570 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX1O00570 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SOX1O00570 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SOX1O00570 Y_RNA.199-201ENST00000364014 102 ntBASIC4.56□□□□□ -1.68
SOX1O00570 Y_RNA.245-201ENST00000364493 95 ntBASIC4.56□□□□□ -1.68
SOX1O00570 MIR34A-201ENST00000385130 110 ntBASIC4.56□□□□□ -1.68
SOX1O00570 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SOX1O00570 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.56□□□□□ -1.68
SOX1O00570 AC079780.1-201ENST00000428259 207 ntBASIC4.56□□□□□ -1.68
SOX1O00570 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX1O00570 NDUFB4P10-201ENST00000452541 359 ntBASIC4.56□□□□□ -1.68
SOX1O00570 IFNWP4-201ENST00000453148 294 ntBASIC4.56□□□□□ -1.68
SOX1O00570 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms