Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.55□□□□□ -2.16
UPK2O00526 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.55□□□□□ -2.16
UPK2O00526 RPS3AP4-201ENST00000555161 764 ntBASIC1.55□□□□□ -2.16
UPK2O00526 AL356432.3-201ENST00000568952 465 ntBASIC1.55□□□□□ -2.16
UPK2O00526 MIR4299-201ENST00000577899 72 ntBASIC1.55□□□□□ -2.16
UPK2O00526 AL670379.10-201ENST00000604330 253 ntBASIC1.55□□□□□ -2.16
UPK2O00526 AL670379.9-201ENST00000605428 253 ntBASIC1.55□□□□□ -2.16
UPK2O00526 AC091965.5-201ENST00000624785 342 ntBASIC1.55□□□□□ -2.16
UPK2O00526 AC017037.3-201ENST00000625016 472 ntBASIC1.55□□□□□ -2.16
UPK2O00526 SCARNA15.3-201ENST00000626315 122 ntBASIC1.55□□□□□ -2.16
UPK2O00526 SCARNA4.1-201ENST00000628597 123 ntBASIC1.55□□□□□ -2.16
UPK2O00526 MTND4P16-201ENST00000466108 1367 ntBASIC1.55□□□□□ -2.16
UPK2O00526 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UPK2O00526 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
UPK2O00526 CENPCP1-201ENST00000533085 2578 ntBASIC1.54□□□□□ -2.16
UPK2O00526 MIR122-201ENST00000385044 85 ntBASIC1.54□□□□□ -2.16
UPK2O00526 MIR95-201ENST00000385072 81 ntBASIC1.54□□□□□ -2.16
UPK2O00526 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
UPK2O00526 RNU6-1025P-201ENST00000410629 104 ntBASIC1.54□□□□□ -2.16
UPK2O00526 ELOCP17-201ENST00000414751 326 ntBASIC1.54□□□□□ -2.16
UPK2O00526 ELOCP9-201ENST00000418624 239 ntBASIC1.54□□□□□ -2.16
UPK2O00526 DPH3P2-201ENST00000422618 250 ntBASIC1.54□□□□□ -2.16
UPK2O00526 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK2O00526 AL591212.2-201ENST00000433923 257 ntBASIC1.54□□□□□ -2.16
UPK2O00526 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK2O00526 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK2O00526 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK2O00526 AL078601.1-201ENST00000444542 271 ntBASIC1.54□□□□□ -2.16
UPK2O00526 AL353705.4-201ENST00000449661 238 ntBASIC1.54□□□□□ -2.16
UPK2O00526 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.54□□□□□ -2.16
UPK2O00526 RPL23AP3-201ENST00000453844 468 ntBASIC1.54□□□□□ -2.16
UPK2O00526 MTATP6P14-201ENST00000455189 673 ntBASIC1.54□□□□□ -2.16
UPK2O00526 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK2O00526 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.54□□□□□ -2.16
UPK2O00526 MTCO1P42-201ENST00000457379 726 ntBASIC1.54□□□□□ -2.16
UPK2O00526 RPL7P43-201ENST00000478876 753 ntBASIC1.54□□□□□ -2.16
UPK2O00526 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK2O00526 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.54□□□□□ -2.16
UPK2O00526 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.54□□□□□ -2.16
UPK2O00526 OR5B19P-201ENST00000531766 928 ntBASIC1.54□□□□□ -2.16
UPK2O00526 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK2O00526 AC022662.1-201ENST00000580252 331 ntBASIC1.54□□□□□ -2.16
UPK2O00526 VN1R82P-201ENST00000601481 356 ntBASIC1.54□□□□□ -2.16
UPK2O00526 AL391001.1-201ENST00000602747 715 ntBASIC1.54□□□□□ -2.16
UPK2O00526 SNRPGP19-201ENST00000603826 189 ntBASIC1.54□□□□□ -2.16
UPK2O00526 AL592221.1-201ENST00000605266 382 ntBASIC1.54□□□□□ -2.16
UPK2O00526 AC022893.3-201ENST00000607665 437 ntBASIC1.54□□□□□ -2.16
UPK2O00526 uc_338.20-201ENST00000621563 178 ntBASIC1.54□□□□□ -2.16
UPK2O00526 YWHAEP7-203ENST00000622054 312 ntBASIC1.54□□□□□ -2.16
UPK2O00526 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.54□□□□□ -2.16
UPK2O00526 MTND5P42-201ENST00000637720 498 ntBASIC1.54□□□□□ -2.16
UPK2O00526 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.54□□□□□ -2.16
UPK2O00526 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK2O00526 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UPK2O00526 ZNF355P-201ENST00000427301 3216 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RNU6-858P-201ENST00000362436 107 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RNA5SP88-201ENST00000365560 109 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RNU6-166P-201ENST00000384371 107 ntBASIC1.53□□□□□ -2.16
UPK2O00526 Y_RNA.534-201ENST00000384599 112 ntBASIC1.53□□□□□ -2.16
UPK2O00526 MIR561-201ENST00000385216 97 ntBASIC1.53□□□□□ -2.16
UPK2O00526 SNORA40C-201ENST00000391285 128 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AL512604.1-201ENST00000404812 257 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RNU2-2P-201ENST00000410396 191 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RNU2-20P-201ENST00000410425 191 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RN7SKP223-201ENST00000410582 62 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AC016831.2-201ENST00000417179 352 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK2O00526 AC092648.1-201ENST00000425870 423 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AL353689.1-201ENST00000438895 199 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK2O00526 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK2O00526 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
UPK2O00526 AL139824.2-201ENST00000458731 1095 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RNA5SP233-201ENST00000459153 113 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RNU6-953P-201ENST00000459154 107 ntBASIC1.53□□□□□ -2.16
UPK2O00526 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK2O00526 AC092104.1-201ENST00000497346 1441 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK2O00526 RNU6-914P-201ENST00000516749 109 ntBASIC1.53□□□□□ -2.16
UPK2O00526 SNORA48.11-201ENST00000517015 89 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK2O00526 AC034114.1-201ENST00000520293 285 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK2O00526 AC023050.2-201ENST00000544968 387 ntBASIC1.53□□□□□ -2.16
UPK2O00526 PSMA3P-201ENST00000555485 635 ntBASIC1.53□□□□□ -2.16
UPK2O00526 ANP32BP3-201ENST00000559213 706 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AL049838.1-201ENST00000563647 981 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK2O00526 KC877982.1-201ENST00000602313 470 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AC087045.1-201ENST00000605856 382 ntBASIC1.53□□□□□ -2.16
UPK2O00526 RNU4-5P-201ENST00000607255 135 ntBASIC1.53□□□□□ -2.16
UPK2O00526 AC092953.2-201ENST00000608000 699 ntBASIC1.53□□□□□ -2.16
UPK2O00526 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK2O00526 AL627230.6-201ENST00000611129 280 ntBASIC1.53□□□□□ -2.16
UPK2O00526 U2.15-201ENST00000611544 191 ntBASIC1.53□□□□□ -2.16
UPK2O00526 U2.16-201ENST00000613119 191 ntBASIC1.53□□□□□ -2.16
UPK2O00526 U2.12-201ENST00000613778 191 ntBASIC1.53□□□□□ -2.16
UPK2O00526 U2.20-201ENST00000613956 192 ntBASIC1.53□□□□□ -2.16
UPK2O00526 U2.9-201ENST00000615427 191 ntBASIC1.53□□□□□ -2.16
UPK2O00526 U2.11-201ENST00000616345 191 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms