Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC004924.1-201ENST00000480160 781 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AC023194.1-201ENST00000493084 308 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 SCARNA11.3-201ENST00000517276 130 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AC090572.1-201ENST00000519251 160 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC188H7C350 OR4R1P-201ENST00000529879 463 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC188H7C350 AC110760.3-201ENST00000598794 467 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AC119751.7-201ENST00000600494 245 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AL645944.1-201ENST00000603857 493 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC188H7C350 AC090582.1-201ENST00000636321 199 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 AC103710.2-202ENST00000641454 2853 ntBASIC2.72□□□□□ -1.97
CCDC188H7C350 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC188H7C350 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC188H7C350 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CCDC188H7C350 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CCDC188H7C350 RNU6-1287P-201ENST00000362914 107 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 SNORA68.1-201ENST00000364537 132 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 RNU6-61P-201ENST00000365528 109 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 SET-203ENST00000372688 801 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC188H7C350 RNU6-116P-201ENST00000384042 109 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 RNU6-1060P-201ENST00000384664 107 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 EEF1A1P41-201ENST00000414667 207 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 BX682237.1-201ENST00000415016 335 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC188H7C350 CALM2P2-201ENST00000428512 440 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC188H7C350 AL358934.1-201ENST00000432346 324 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC188H7C350 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC188H7C350 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC188H7C350 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC188H7C350 AL049873.1-201ENST00000480540 376 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC188H7C350 AC104806.1-201ENST00000508720 308 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 MTCO3P28-201ENST00000513351 515 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 RNU6-430P-201ENST00000517078 107 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 RN7SKP40-201ENST00000517211 242 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.71□□□□□ -1.98
CCDC188H7C350 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC188H7C350 HSPE1P20-201ENST00000538133 289 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC188H7C350 AC027807.1-201ENST00000559921 996 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC188H7C350 AL391840.1-201ENST00000571144 367 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AC090616.3-201ENST00000582184 217 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 MIR3199-1-201ENST00000582434 88 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 MIR3117-201ENST00000584034 78 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AL391813.1-201ENST00000603098 260 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 RPL23AP88-201ENST00000605759 454 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AC135507.1-201ENST00000607214 561 ntBASIC2.71□□□□□ -1.98
CCDC188H7C350 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC188H7C350 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC188H7C350 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCDC188H7C350 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC188H7C350 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CCDC188H7C350 AC093536.2-201ENST00000565257 1406 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 RNU6-1097P-201ENST00000363586 107 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 RNU6-461P-201ENST00000364195 107 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 MIR1-2-201ENST00000384961 85 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 SNORA40C-201ENST00000391285 128 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AL139095.1-201ENST00000404326 391 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 RPLP0P7-201ENST00000416050 667 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 PIGFP2-201ENST00000421400 651 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC188H7C350 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC188H7C350 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC188H7C350 MTND2P22-201ENST00000444325 1033 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 FTH1P25-201ENST00000447665 469 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC188H7C350 MTCYBP1-201ENST00000454315 1119 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AC022364.2-201ENST00000457963 554 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AL121769.1-201ENST00000469473 401 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC188H7C350 AC010493.1-201ENST00000513479 292 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 RN7SKP298-201ENST00000515950 94 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 BTF3P12-201ENST00000519620 469 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC188H7C350 SUB1P2-201ENST00000556401 297 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AC006362.1-201ENST00000567392 174 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.7□□□□□ -1.98
CCDC188H7C350 MIR4325-201ENST00000583049 90 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 MIR4765-201ENST00000585007 77 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 RSL24D1P11-201ENST00000591045 491 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AL138889.2-201ENST00000603883 242 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 RN7SKP299-201ENST00000606679 301 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AC008536.2-201ENST00000607284 349 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AC093648.1-201ENST00000623546 606 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 AL359740.1-201ENST00000624340 592 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 CU459211.1-201ENST00000635667 749 ntBASIC2.7□□□□□ -1.98
CCDC188H7C350 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC188H7C350 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC188H7C350 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC188H7C350 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CCDC188H7C350 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms