Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RNU6-488P-201ENST00000515918 99 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC125611.1-201ENST00000549563 229 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 MIR151B-201ENST00000584249 96 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 BNIP3P27-201ENST00000599991 412 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC073544.2-201ENST00000601155 540 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC016727.2-201ENST00000603988 621 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AP000238.1-201ENST00000608759 426 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AL021879.1-201ENST00000611756 288 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AL359854.1-201ENST00000614203 1594 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 SNORA25.9-201ENST00000365087 128 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 Z86062.1-201ENST00000406773 777 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 Z82210.1-201ENST00000440037 231 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 MTCO1P44-201ENST00000441935 243 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AL035666.1-201ENST00000446195 348 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 PRELID3BP1-201ENST00000457142 540 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 RAP1BP2-201ENST00000478270 544 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AP001025.1-201ENST00000486139 332 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 SMURF2P1-201ENST00000514992 481 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 RNU6-1256P-201ENST00000516539 103 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AC002400.1-201ENST00000569310 726 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 MIR5000-201ENST00000577717 103 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 SNORA77B-201ENST00000578179 125 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AL161729.4-201ENST00000604650 476 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AC004775.1-201ENST00000607389 753 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 AC018926.3-201ENST00000618841 406 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 MIR5739-201ENST00000619803 80 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 ZNF663P-202ENST00000641770 1131 ntBASIC0.34□□□□□ -2.36
CPSF4LA6NMK7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 RNU6-942P-201ENST00000363002 107 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 RNU6-444P-201ENST00000383988 108 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 RNU6-968P-201ENST00000384076 107 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 RNU6-921P-201ENST00000384361 107 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 MIR597-201ENST00000384968 97 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AL591034.2-201ENST00000402839 359 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 SRIP3-201ENST00000413200 219 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 USP9YP26-201ENST00000421008 661 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 BPY2DP-201ENST00000422208 265 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 USP9YP18-201ENST00000425912 695 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 MTND4P6-201ENST00000438297 472 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 USP9YP17-201ENST00000444617 696 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 TPRKBP1-201ENST00000456243 481 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC113420.1-201ENST00000507903 571 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC025465.3-201ENST00000510570 311 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 SCARNA15.2-201ENST00000516409 127 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC103833.1-201ENST00000517442 172 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 HSPA8P13-201ENST00000523715 472 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC124947.2-202ENST00000552735 133 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AL137100.2-201ENST00000555786 315 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 VN1R82P-201ENST00000601481 356 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AL022067.1-201ENST00000602426 454 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 SNRPGP17-201ENST00000603780 214 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 HMGB1P51-201ENST00000605166 638 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC021851.1-201ENST00000608537 1082 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 AC027335.2-201ENST00000624030 375 ntBASIC0.33□□□□□ -2.36
CPSF4LA6NMK7 RNU6-251P-201ENST00000363235 104 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 SNORD18A-201ENST00000363753 72 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 SNORD1A-201ENST00000364968 72 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 SNORD82-201ENST00000365530 70 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 RNU6-1235P-201ENST00000384559 107 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 MIR135A2-201ENST00000384854 100 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 MIR888-201ENST00000401186 77 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AL117342.1-201ENST00000404861 406 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 USP9YP33-201ENST00000412220 421 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 BTF3P8-201ENST00000414577 526 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 C1DP1-201ENST00000426049 402 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 RPL7P34-201ENST00000433316 712 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AL392003.1-201ENST00000434394 243 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AC234064.1-201ENST00000436312 247 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 ARL5AP3-201ENST00000439327 386 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AC027119.1-201ENST00000440877 241 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 AL161788.1-201ENST00000441805 169 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 PGBD4P5-201ENST00000445958 426 ntBASIC0.32□□□□□ -2.36
CPSF4LA6NMK7 RNU6-498P-201ENST00000459468 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms