Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RGPD3A6NKT7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RGPD3A6NKT7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
RGPD3A6NKT7 RNU6-1083P-201ENST00000384022 107 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 AL049870.4-201ENST00000555741 486 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 AC007349.4-201ENST00000608114 532 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 MTND2P41-201ENST00000637599 773 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.73□□□□□ -2.29
RGPD3A6NKT7 RNU6-989P-201ENST00000362756 107 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 SNORA22-201ENST00000383907 134 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 RNU6-339P-201ENST00000384310 107 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 SNORA22C-201ENST00000384614 134 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 RPL37P10-201ENST00000412884 288 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.73□□□□□ -2.29
RGPD3A6NKT7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.73□□□□□ -2.29
RGPD3A6NKT7 SNORA62.5-201ENST00000516634 120 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
RGPD3A6NKT7 AL136313.1-201ENST00000624804 202 ntBASIC0.73□□□□□ -2.29
RGPD3A6NKT7 RNU6-730P-201ENST00000383954 104 ntBASIC0.72□□□□□ -2.29
RGPD3A6NKT7 MIR325-201ENST00000385260 98 ntBASIC0.72□□□□□ -2.29
RGPD3A6NKT7 RNU6-775P-201ENST00000459318 96 ntBASIC0.72□□□□□ -2.29
RGPD3A6NKT7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.72□□□□□ -2.29
RGPD3A6NKT7 AC005668.1-201ENST00000571142 476 ntBASIC0.72□□□□□ -2.29
RGPD3A6NKT7 MTND4LP5-201ENST00000605152 292 ntBASIC0.72□□□□□ -2.29
RGPD3A6NKT7 MIR8074-201ENST00000615081 81 ntBASIC0.72□□□□□ -2.29
RGPD3A6NKT7 Y_RNA.67-201ENST00000362870 100 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 Y_RNA.274-201ENST00000364714 101 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 SSXP10-201ENST00000402595 565 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.71□□□□□ -2.3
RGPD3A6NKT7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.71□□□□□ -2.3
RGPD3A6NKT7 AC109927.2-201ENST00000506416 303 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
RGPD3A6NKT7 AL391261.3-201ENST00000557194 520 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 AC010900.2-201ENST00000604508 210 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 AC010738.1-201ENST00000604970 987 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 AC104763.3-201ENST00000613765 618 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 AC087821.2-201ENST00000637086 450 ntBASIC0.71□□□□□ -2.3
RGPD3A6NKT7 RNU6-222P-201ENST00000362438 107 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 RNU6-35P-201ENST00000384530 107 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 MIR561-201ENST00000385216 97 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 TOMM22P2-201ENST00000430735 237 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 RSU1P2-202ENST00000437884 485 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AC008945.2-201ENST00000606056 604 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.7□□□□□ -2.3
RGPD3A6NKT7 MTND4P8-201ENST00000514997 1362 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AC009310.1-201ENST00000414414 451 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 ARPC3P5-201ENST00000448802 534 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AC099513.1-201ENST00000490423 301 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.7□□□□□ -2.3
RGPD3A6NKT7 AC073308.1-201ENST00000623696 305 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 Z69720.2-201ENST00000624755 279 ntBASIC0.7□□□□□ -2.3
RGPD3A6NKT7 TAF9BP2-201ENST00000400856 499 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 SNRPEP7-201ENST00000438350 220 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 AC112492.4-201ENST00000456549 352 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.69□□□□□ -2.3
RGPD3A6NKT7 AP003327.1-201ENST00000529684 127 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 EEF1B2P4-201ENST00000551398 348 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 DUXAP1-201ENST00000556632 463 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 MIR5739-201ENST00000619803 80 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 AL512506.2-201ENST00000624472 458 ntBASIC0.69□□□□□ -2.3
RGPD3A6NKT7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 MIR424-201ENST00000362227 98 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 RNU6-750P-201ENST00000390946 107 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC097499.1-201ENST00000444277 208 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 SNORA31.22-201ENST00000517204 135 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 OR5B19P-201ENST00000531766 928 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC105224.1-201ENST00000587055 421 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC010620.1-201ENST00000601088 1102 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC090116.1-201ENST00000615679 446 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC005832.2-201ENST00000538921 1430 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 Y_RNA.471-201ENST00000384312 102 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AL449283.1-202ENST00000418249 604 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 MRPS17P3-201ENST00000465453 385 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC104629.2-201ENST00000468627 598 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AL121890.5-201ENST00000620848 304 ntBASIC0.68□□□□□ -2.3
RGPD3A6NKT7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.68□□□□□ -2.3
RGPD3A6NKT7 MTND5P30-201ENST00000452896 1731 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms