Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC189A1A4V9 MTCO1P19-201ENST00000443487 500 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC189A1A4V9 VN1R34P-201ENST00000447387 883 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC090096.1-201ENST00000489168 390 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC189A1A4V9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC105417.1-201ENST00000514691 285 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC074050.1-201ENST00000563247 211 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC119751.7-201ENST00000600494 245 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 U3.45-201ENST00000607547 219 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC039056.2-201ENST00000622261 511 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 AC091903.1-201ENST00000624322 454 ntBASIC3.17□□□□□ -1.9
CCDC189A1A4V9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RNU6-942P-201ENST00000363002 107 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RNU6-45P-201ENST00000384471 107 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RNU6-1072P-201ENST00000384703 107 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RNU6-443P-201ENST00000384780 107 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 SNORA48.7-201ENST00000391302 135 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RNU2-63P-201ENST00000410792 194 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RNU6-607P-201ENST00000411283 108 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RPS29P4-201ENST00000414733 161 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 CDK8P2-201ENST00000415020 547 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RPL7P43-201ENST00000478876 753 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC117522.2-201ENST00000510049 657 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC074344.1-201ENST00000512823 224 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 RNU1-45P-201ENST00000517191 141 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC109329.1-201ENST00000518744 317 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 MIR4703-201ENST00000577728 79 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 NBR2-204ENST00000587322 63 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AL162713.1-201ENST00000604480 262 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 HMGB1P24-202ENST00000615653 685 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC026585.1-201ENST00000619582 524 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC012442.3-202ENST00000636742 206 ntBASIC3.16□□□□□ -1.9
CCDC189A1A4V9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC189A1A4V9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC189A1A4V9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC189A1A4V9 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 RNU6-384P-201ENST00000364900 104 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 RNU6-1042P-201ENST00000384204 107 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 MTATP6P18-201ENST00000417994 673 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC003685.2-201ENST00000422795 395 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 SUMO1P4-201ENST00000429430 302 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AL358934.1-201ENST00000432346 324 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC236972.1-201ENST00000433225 199 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AL360221.1-201ENST00000445989 335 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 Z83846.1-201ENST00000446798 265 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AL356010.1-201ENST00000456364 102 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 CYP2C59P-201ENST00000457790 269 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 RPS29P15-201ENST00000458329 171 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC007458.1-201ENST00000542812 373 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 PSMA3P-201ENST00000555485 635 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC025678.1-201ENST00000567861 338 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 MIR1254-2-201ENST00000579553 63 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 LRRC37A5P-203ENST00000580181 585 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 PIGPP4-201ENST00000584447 307 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 BNIP3P30-201ENST00000601184 574 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 RN7SKP299-201ENST00000606679 301 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 MIR5739-201ENST00000619803 80 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC136475.10-201ENST00000620253 385 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AC073346.2-201ENST00000624724 2058 ntBASIC3.15□□□□□ -1.91
CCDC189A1A4V9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC189A1A4V9 AL035425.3-201ENST00000564206 4996 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 RNA5SP240-201ENST00000365355 128 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 SNORD116-2-201ENST00000384274 95 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 SNORD116-6-201ENST00000384711 96 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms