Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC091953.5-201ENST00000622919 233 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 FP236240.3-201ENST00000623061 327 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AL034408.1-202ENST00000636088 415 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 MTND5P10-201ENST00000603719 1809 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 MTND5P19-201ENST00000424872 1794 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC007496.3-201ENST00000624987 3443 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC022336.2-201ENST00000568966 2538 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-428P-201ENST00000362942 107 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-1317P-201ENST00000364582 104 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 ARF4P2-201ENST00000430209 526 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC108751.2-201ENST00000469993 231 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC128713.1-201ENST00000471495 306 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC097473.1-201ENST00000508142 408 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC107016.1-201ENST00000550463 337 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC063950.1-201ENST00000552036 308 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 TRAV32-201ENST00000553993 340 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC025627.2-201ENST00000576220 160 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 MIR3976-201ENST00000606807 139 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 AC134503.1-201ENST00000633048 54 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 U2.21-201ENST00000637295 81 ntBASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
CCDC163A0A0D9SF12 MTND4P23-201ENST00000447723 1363 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.128-201ENST00000363391 112 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 RNA5SP97-201ENST00000365006 84 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 Z98749.2-208ENST00000381646 500 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-474P-201ENST00000384243 107 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-72P-201ENST00000384285 79 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 U8.11-201ENST00000384699 133 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 U8.12-201ENST00000384701 133 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 MIR559-201ENST00000385188 96 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 MIR548P-201ENST00000408336 84 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 RNA5SP31-201ENST00000411144 127 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 SYF2P2-201ENST00000417620 583 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 ATG3P1-201ENST00000419507 911 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 RPL23AP82-202ENST00000427528 469 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 AL159987.2-201ENST00000432754 307 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 U8.18-201ENST00000459285 133 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 RPL32P34-201ENST00000486380 400 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 RN7SL271P-201ENST00000487601 295 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 SNORA31.1-201ENST00000515993 133 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 SNORA31.5-201ENST00000516190 133 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 SCARNA15.1-201ENST00000516384 125 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 SNORA74D-201ENST00000516404 141 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 HIGD1AP1-201ENST00000550979 275 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 AMZ2P1-203ENST00000565833 850 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 AC009314.1-201ENST00000603871 304 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 AC011890.2-201ENST00000613393 294 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 SRP72P2-201ENST00000344851 1979 ntBASIC4.02□□□□□ -1.77
CCDC163A0A0D9SF12 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 MIR448-201ENST00000362131 111 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-527P-201ENST00000363425 104 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-890P-201ENST00000384121 107 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 MIR491-201ENST00000384877 84 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 MIR521-1-201ENST00000384902 87 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 U3.37-201ENST00000408528 213 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 RNA5SP38-201ENST00000410750 119 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 AL358472.1-201ENST00000431295 329 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 TBCAP1-201ENST00000436520 327 ntBASIC4.01□□□□□ -1.77
CCDC163A0A0D9SF12 HIGD1AP2-201ENST00000446367 280 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms