Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU1-22P-201ENST00000363334 158 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 RNU6-1164P-201ENST00000364428 107 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 RNU6-1080P-201ENST00000383982 107 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORD116-23-201ENST00000384645 92 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR764-201ENST00000390811 85 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 RPL17P50-201ENST00000396131 546 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 RPS27P16-201ENST00000425758 201 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 PTGES3P4-201ENST00000426243 356 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 MTND2P21-201ENST00000436242 1042 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 AL050341.1-201ENST00000447743 313 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 RPL32P14-201ENST00000463196 378 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 RNA5SP404-201ENST00000517118 132 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 RNU6-667P-201ENST00000517186 102 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 RAB11AP2-201ENST00000545905 639 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 AC008127.2-201ENST00000549925 1075 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 AC004805.2-201ENST00000605382 482 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 AC011939.3-201ENST00000613686 466 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 AL121890.5-201ENST00000620848 304 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 RNA5SP327-201ENST00000362494 101 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR1261-201ENST00000408659 82 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 RPL26P27-201ENST00000414397 437 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AL606490.4-201ENST00000423117 127 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AL135790.2-201ENST00000437701 267 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 CR769776.1-201ENST00000441254 787 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 RPL9P9-202ENST00000466501 579 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AC117454.1-201ENST00000491120 168 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AC025465.3-201ENST00000510570 311 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 VN1R80P-201ENST00000597126 338 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 NIFKP6-201ENST00000598115 845 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AC008121.3-201ENST00000618726 433 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 AC079416.3-201ENST00000624479 549 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR4275-201ENST00000636486 87 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 HAUS6P2-201ENST00000433254 2404 ntBASIC0.56□□□□□ -2.32
TRAV1-2A0A0B4J238 SGO1P1-201ENST00000603525 1447 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 RNU5E-1-201ENST00000362477 120 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORD1A-201ENST00000364968 72 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR16-1-201ENST00000385271 89 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORA48.1-201ENST00000390879 135 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AL353621.1-201ENST00000418219 243 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AC007435.1-201ENST00000421086 415 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 NANOGP2-201ENST00000435391 727 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AL353706.1-201ENST00000436728 494 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AL160314.1-201ENST00000490836 438 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 CENPUP1-201ENST00000526649 1202 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AL357094.1-201ENST00000603845 844 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AC004853.1-201ENST00000604902 698 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AC096586.1-201ENST00000610267 561 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AL118556.2-201ENST00000614375 824 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AL078604.3-201ENST00000615580 211 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AC107905.1-201ENST00000616204 426 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 AC090617.9-201ENST00000623751 147 ntBASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV1-2A0A0B4J238 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 RNU1-58P-201ENST00000362413 163 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR100-201ENST00000385259 80 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 RN7SKP284-201ENST00000411002 343 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AL451054.2-201ENST00000420896 202 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 ELOCP14-201ENST00000428070 331 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 ELOCP7-201ENST00000439968 331 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 SNRPFP4-201ENST00000456366 242 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 MEMO1P3-201ENST00000459811 302 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 RPL21P47-201ENST00000483696 477 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORA31.17-201ENST00000516953 127 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 MTCO2P15-201ENST00000532655 656 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC090115.3-201ENST00000553218 849 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AL121821.2-201ENST00000556081 394 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms