Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 RNA5SP240-201ENST00000365355 128 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 RNA5SP88-201ENST00000365560 109 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 RNU6-748P-201ENST00000384648 107 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 MIR9-3-201ENST00000385084 90 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AL359634.1-202ENST00000404721 284 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 MIR1294-201ENST00000408503 142 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 RPL23AP39-201ENST00000415533 405 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AL160275.3-201ENST00000423876 471 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC096920.1-201ENST00000423991 241 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 USP9YP11-201ENST00000427537 717 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AL591806.2-201ENST00000433122 173 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AL645568.3-201ENST00000433683 316 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AP000542.1-201ENST00000448473 371 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 ZNF886P-201ENST00000450781 723 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 CYP2C59P-201ENST00000457790 269 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC140059.1-201ENST00000489238 361 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC055855.1-201ENST00000489563 579 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC108210.2-201ENST00000503681 201 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC091965.2-201ENST00000512324 613 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC112198.4-201ENST00000515450 351 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 SNORA4.4-201ENST00000515921 135 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC107953.1-201ENST00000522216 297 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 MIR4299-201ENST00000577899 72 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC007038.2-201ENST00000608095 740 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AP003476.1-201ENST00000623984 516 ntBASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
USH1CQ9Y6N9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 RNU6-560P-201ENST00000364007 108 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 Y_RNA.311-201ENST00000365068 96 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 RNU6-298P-201ENST00000390888 96 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 MIR1302-8-201ENST00000408342 128 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 MIR320C1-201ENST00000408566 88 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 RNU6-1140P-201ENST00000410517 106 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 POLHP1-201ENST00000411806 470 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 HMGB1P27-201ENST00000431429 603 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 RPL23AP3-201ENST00000453844 468 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC112771.1-201ENST00000463581 102 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC011005.2-201ENST00000487324 359 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 MTND2P31-201ENST00000512602 616 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 RNU6-1183P-201ENST00000517054 60 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC015712.3-201ENST00000559380 164 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 MIR4769-201ENST00000584126 77 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AL031274.2-201ENST00000599419 203 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC131235.4-201ENST00000609288 620 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 AC092574.1-201ENST00000609771 420 ntBASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USH1CQ9Y6N9 RNU1-72P-201ENST00000362976 153 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 U3.13-201ENST00000364804 214 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 MIR19A-201ENST00000384878 82 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 HMGN2P39-201ENST00000398005 273 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AL356432.1-201ENST00000405809 419 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 MTCO1P17-201ENST00000411522 491 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 USP9YP33-201ENST00000412220 421 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AL449283.1-202ENST00000418249 604 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 USP9YP35-201ENST00000435696 412 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 RPS15AP9-201ENST00000439856 381 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AL161788.1-201ENST00000441805 169 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 RPL23AP6-201ENST00000446637 472 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 RNU7-59P-201ENST00000459101 61 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AC018437.1-201ENST00000492214 406 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 RNA5SP137-201ENST00000516833 135 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 OR5AL2P-201ENST00000532185 920 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AC092451.2-201ENST00000538746 658 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AC243960.4-201ENST00000600532 288 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AC245297.2-201ENST00000610119 565 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AC068944.2-201ENST00000610373 403 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 AC241585.2-209ENST00000638217 143 ntBASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH1CQ9Y6N9 U8.3-201ENST00000363321 132 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 RNU4-42P-201ENST00000364738 142 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 RNU6-1280P-201ENST00000365211 107 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms