Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RAC1P9-201ENST00000604990 392 ntBASIC4.14□□□□□ -1.75
HCFC2Q9Y5Z7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.14□□□□□ -1.75
HCFC2Q9Y5Z7 AL353748.2-201ENST00000622148 471 ntBASIC4.14□□□□□ -1.75
HCFC2Q9Y5Z7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.14□□□□□ -1.75
HCFC2Q9Y5Z7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HCFC2Q9Y5Z7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HCFC2Q9Y5Z7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
HCFC2Q9Y5Z7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HCFC2Q9Y5Z7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 MAPK10-372ENST00000641954 3413 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 Y_RNA.117-201ENST00000363294 101 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 RNU6-770P-201ENST00000363929 105 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 SNORA20.1-201ENST00000364790 130 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 RNU6-1093P-201ENST00000391194 107 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 RNU6-325P-201ENST00000411132 105 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AL513331.1-201ENST00000411908 397 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AL353997.1-201ENST00000432936 108 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AL590664.1-201ENST00000448065 339 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AC104619.4-201ENST00000510773 249 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 GMPSP1-201ENST00000514075 579 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 Y_RNA.687-201ENST00000516558 91 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AC109329.1-201ENST00000518744 317 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AC126177.3-201ENST00000551839 688 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 TRAV32-201ENST00000553993 340 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 U3.45-201ENST00000607547 219 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AL159153.1-201ENST00000619688 317 ntBASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.13□□□□□ -1.75
HCFC2Q9Y5Z7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AC073346.2-201ENST00000624724 2058 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AC009812.4-201ENST00000569134 1805 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 RNU1-15P-201ENST00000353977 144 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 RNA5SP72-201ENST00000364442 117 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 U8.8-201ENST00000365399 135 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 NDUFB4P4-201ENST00000404822 243 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 RNU2-38P-201ENST00000410856 79 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AL139247.1-201ENST00000422768 325 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 HSPD1P21-201ENST00000436541 245 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 RNU6-1037P-201ENST00000459571 107 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 RPL21P11-201ENST00000461458 483 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 Y_RNA.700-201ENST00000516806 100 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 HSPE1P20-201ENST00000538133 289 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 MIR1273C-201ENST00000578669 77 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 MIR5701-3-201ENST00000578890 82 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 MIR5701-1-201ENST00000585138 82 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AC008962.1-201ENST00000605729 304 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 AC107294.1-201ENST00000609524 467 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 MIR5701-2-201ENST00000615634 82 ntBASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HCFC2Q9Y5Z7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 NEAT1-202ENST00000501122 22743 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 Y_RNA.60-201ENST00000362831 98 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 RNU6-611P-201ENST00000384276 104 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 RNU6-933P-201ENST00000384424 107 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 MIR301A-201ENST00000385261 86 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 AL513475.1-201ENST00000406602 315 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 AL096701.2-201ENST00000416920 238 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 EIF4EP2-201ENST00000422816 654 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 AL138785.1-201ENST00000425821 331 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 AP000907.1-201ENST00000428428 510 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 RPL26P6-201ENST00000440913 438 ntBASIC4.11□□□□□ -1.75
HCFC2Q9Y5Z7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms