Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC5.45□□□□□ -1.54
GTF3C3Q9Y5Q9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
GTF3C3Q9Y5Q9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GTF3C3Q9Y5Q9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
GTF3C3Q9Y5Q9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
GTF3C3Q9Y5Q9 GABRG2-229ENST00000641017 3628 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 SNORA41-201ENST00000384675 132 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 SNORA75.6-201ENST00000391318 127 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 U3.36-201ENST00000408418 213 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 AL159169.1-201ENST00000421119 127 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 AL358075.3-201ENST00000426289 226 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 RPL21P40-201ENST00000428586 483 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 AC005534.2-201ENST00000431047 433 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 RPS3AP46-201ENST00000448352 682 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 AC005741.1-201ENST00000511094 432 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 NDUFB9P3-201ENST00000521269 501 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 AL356055.1-201ENST00000602528 446 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 uc_338.14-201ENST00000613162 166 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 AC097372.5-201ENST00000623665 376 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 AC138627.2-201ENST00000624202 601 ntBASIC5.44□□□□□ -1.54
GTF3C3Q9Y5Q9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 MAPK10-263ENST00000641052 4307 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 MTND5P19-201ENST00000424872 1794 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 RNA5SP191-201ENST00000362585 102 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 RN7SKP95-201ENST00000362860 303 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 RNU6-842P-201ENST00000384269 107 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 MIR1179-201ENST00000408703 91 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 RNA5SP178-201ENST00000410380 128 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC007969.2-201ENST00000441891 191 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 RPL21P23-201ENST00000446654 460 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 MTCO3P10-201ENST00000455912 772 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 BX284632.1-201ENST00000478218 541 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC093840.1-201ENST00000511599 336 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 RN7SKP83-201ENST00000516512 178 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AP001880.2-201ENST00000538233 448 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC105137.2-201ENST00000569073 466 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 MTCO3P13-201ENST00000577757 781 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AL512329.2-201ENST00000607350 548 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC107294.3-201ENST00000609211 526 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 RNA5SP440-201ENST00000612665 119 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 RNVU1-4-201ENST00000612985 164 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 MAPK10-322ENST00000641485 4530 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 AC073073.2-201ENST00000609827 2578 ntBASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GTF3C3Q9Y5Q9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 Y_RNA.404-201ENST00000383978 102 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 MIR3065-201ENST00000390137 79 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 SDHCP2-201ENST00000398565 501 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 snoU13.20-201ENST00000459180 104 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 RN7SL329P-201ENST00000467740 299 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 RNU6-1213P-201ENST00000517075 94 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 AL161729.3-201ENST00000603533 673 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 AL080274.1-201ENST00000605565 220 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 MIR6861-201ENST00000618657 64 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 AC007792.1-201ENST00000623023 402 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 MTND5P1-201ENST00000445440 1375 ntBASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GTF3C3Q9Y5Q9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 AC110774.1-201ENST00000623567 2018 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 RBBP8P1-201ENST00000449447 1844 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 RNU6-1059P-201ENST00000363752 98 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 RNA5SP175-201ENST00000364275 119 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 SNORA71.2-201ENST00000364941 134 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 CD24P4-201ENST00000382840 243 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 AC007677.1-201ENST00000445757 515 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 RPS29P27-201ENST00000463711 170 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 RN7SL826P-201ENST00000479724 288 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms