Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 RNU2-41P-201ENST00000410991 178 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AC080125.1-201ENST00000414888 684 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AL353678.1-201ENST00000422735 741 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 RPL27AP8-201ENST00000424277 446 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AL365400.1-201ENST00000431854 640 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 ELOCP23-201ENST00000452014 332 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 RNU7-180P-201ENST00000459240 63 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 HMGN2P26-201ENST00000463169 339 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 SNORA31.8-201ENST00000516327 108 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AC023050.3-201ENST00000541142 333 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AC013553.2-201ENST00000604244 589 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 RNU6-89P-201ENST00000606519 100 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 AC090617.10-201ENST00000624308 134 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 MTND5P42-201ENST00000637720 498 ntBASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAI2Q9Y5P3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 RNU6-50P-201ENST00000362356 103 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 RNU6-845P-201ENST00000362578 103 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 RNU4-20P-201ENST00000365601 151 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 RNU6-38P-201ENST00000384085 107 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 CISD1P1-201ENST00000393907 327 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AC104058.1-201ENST00000448028 297 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 RNU6-333P-201ENST00000459117 107 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 RNU7-170P-201ENST00000459303 61 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 RN7SL442P-201ENST00000473804 320 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AC098591.2-201ENST00000510152 315 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 MTND3P22-201ENST00000510932 243 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 RNU6-685P-201ENST00000517088 95 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AL359314.1-201ENST00000616913 261 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 AL136221.1-201ENST00000621449 509 ntBASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAI2Q9Y5P3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.142-201ENST00000363491 102 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 MIR514A2-201ENST00000385131 88 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 MIR514A3-201ENST00000385132 88 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.615-201ENST00000410769 117 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RNU4-47P-201ENST00000410876 114 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RNU2-71P-201ENST00000411395 189 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC092809.3-201ENST00000415453 231 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AL353705.1-201ENST00000433468 480 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 VDAC1P3-201ENST00000434069 851 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 HMGN2P7-201ENST00000456186 273 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AL590639.1-201ENST00000456484 337 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RPL31P13-201ENST00000484151 370 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RNU6-927P-201ENST00000516199 100 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RNU2-58P-201ENST00000516403 183 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RNU6-143P-201ENST00000516942 93 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 RNU6-1314P-201ENST00000517139 104 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC104027.1-201ENST00000521887 300 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC087241.2-201ENST00000535801 324 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 MIR5047-201ENST00000579212 100 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC022893.3-201ENST00000607665 437 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC009248.2-201ENST00000619826 254 ntBASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAI2Q9Y5P3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms