Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPL21P104-201ENST00000464143 478 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 SNRPGP7-201ENST00000469016 106 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AC020890.1-201ENST00000491837 504 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AC091959.1-201ENST00000495857 238 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 ENPP7P9-201ENST00000514456 627 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 HSPE1P4-201ENST00000550617 308 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR4489-201ENST00000578869 62 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR6134-201ENST00000617606 109 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 AL023881.1-201ENST00000621088 301 ntBASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA11Q9Y5H2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU1-94P-201ENST00000362627 173 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 Y_RNA.136-201ENST00000363444 102 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-1141P-201ENST00000364520 107 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU1-140P-201ENST00000365040 165 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 U8.10-201ENST00000384260 133 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-1289P-201ENST00000384431 106 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR329-1-201ENST00000385028 80 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 RN7SKP125-201ENST00000410481 302 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-1001P-201ENST00000411265 100 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC012308.1-201ENST00000451232 178 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AP001324.2-201ENST00000461163 319 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AP001025.1-201ENST00000486139 332 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 RNA5SP43-201ENST00000516559 110 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC005868.1-201ENST00000536421 331 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR5571-201ENST00000577998 113 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC004832.4-201ENST00000608952 331 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 LINC00901.1-201ENST00000617252 152 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC073349.3-201ENST00000617616 186 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC019206.1-201ENST00000621938 425 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 AC107068.1-201ENST00000563286 4218 ntBASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA11Q9Y5H2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 NOL8P1-201ENST00000508336 3529 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 RPL23P2-201ENST00000320371 421 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 SNORD115-8-201ENST00000363856 82 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 Y_RNA.240-201ENST00000364469 95 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 Y_RNA.304-201ENST00000365011 112 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 SNORD115-38-201ENST00000365037 82 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 Y_RNA.331-201ENST00000365267 102 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 RNU6-171P-201ENST00000384354 107 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 MIR544A-201ENST00000384855 91 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 RPS20P14-201ENST00000412545 360 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 SETP5-201ENST00000437270 562 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AC007969.2-201ENST00000441891 191 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 RPL34P20-201ENST00000442771 351 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 RNA5SP54-201ENST00000516951 92 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AP005660.1-201ENST00000522972 293 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AL391261.3-201ENST00000557194 520 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 UBL5P4-201ENST00000562584 236 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AC006116.3-201ENST00000592968 361 ntBASIC4.76□□□□□ -1.65
PCDHGA11Q9Y5H2 AC005176.2-201ENST00000596933 147 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms