Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC008526.1-201ENST00000509149 338 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 AC109479.2-201ENST00000517842 174 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 AC087499.8-201ENST00000578406 226 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 APOOP1-201ENST00000604695 592 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-85P-201ENST00000605989 107 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 AC069234.5-201ENST00000611056 416 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 SCARNA4-202ENST00000625402 129 ntBASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA3Q9Y5H0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 Y_RNA.135-201ENST00000363439 95 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 RNA5SP399-201ENST00000364003 117 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-384P-201ENST00000364900 104 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-658P-201ENST00000384606 106 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-293P-201ENST00000411259 106 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AL645568.3-201ENST00000433683 316 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC005019.1-201ENST00000436455 431 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 MRPS31P2-201ENST00000451581 518 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC087884.1-201ENST00000469738 328 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 RPL7P43-201ENST00000478876 753 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 Y_RNA.675-201ENST00000516389 149 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-1332P-201ENST00000516666 104 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR4790-201ENST00000577799 79 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR4474-201ENST00000579189 78 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC138761.3-201ENST00000579993 334 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC113139.1-201ENST00000605049 239 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC019176.2-201ENST00000611579 315 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 FAM157A-202ENST00000615155 405 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AL359314.1-201ENST00000616913 261 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 AC009093.8-201ENST00000641769 292 ntBASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.74□□□□□ -1.81
PCDHGA3Q9Y5H0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 Y_RNA.184-201ENST00000363884 108 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 Y_RNA.387-201ENST00000383918 102 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORA5A-201ENST00000384111 134 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR548K-201ENST00000408406 116 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR1251-201ENST00000408552 70 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 ARF4P2-201ENST00000430209 526 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 Y_RNA.635-201ENST00000459041 101 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 AL049830.2-201ENST00000480072 201 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 HMGN1P11-201ENST00000508668 303 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORA31.1-201ENST00000515993 133 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORA31.5-201ENST00000516190 133 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-1088P-201ENST00000516850 104 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 AC004852.3-201ENST00000614131 326 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 Z69720.2-201ENST00000624755 279 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MIR1302-1-201ENST00000637932 143 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 AC112487.2-201ENST00000637950 304 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 MFSD8-236ENST00000641509 4050 ntBASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA3Q9Y5H0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms