Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.72□□□□□ -1.81
PCDHGA6Q9Y5G7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHGA6Q9Y5G7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA6Q9Y5G7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHGA6Q9Y5G7 AL353746.1-201ENST00000566293 6881 ntBASIC3.71□□□□□ -1.81
PCDHGA6Q9Y5G7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHGA6Q9Y5G7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 SNORA73.2-201ENST00000364946 201 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 Y_RNA.431-201ENST00000384086 102 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 MIR7-3-201ENST00000384898 110 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AL391417.1-201ENST00000404100 426 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 U3.37-201ENST00000408528 213 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 RNA5SP38-201ENST00000410750 119 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 RPL37P10-201ENST00000412884 288 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 SKA2P1-201ENST00000425592 390 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 SETP5-201ENST00000437270 562 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 MTND1P17-201ENST00000448961 204 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC233279.1-201ENST00000455300 423 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 snoU13.28-201ENST00000459235 104 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 RPL21P11-201ENST00000461458 483 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 H3F3AP1-201ENST00000559984 334 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AC110741.2-201ENST00000605278 268 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 AL133216.2-202ENST00000634512 349 ntBASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PCDHGA6Q9Y5G7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 SNORD46.1-201ENST00000364139 104 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 Y_RNA.339-201ENST00000365325 102 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 RN7SKP158-201ENST00000410453 326 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 RNA5SP31-201ENST00000411144 127 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 PGBD4P6-201ENST00000421501 610 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AC098831.1-201ENST00000440661 216 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 UBE2V1P7-201ENST00000446395 340 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 RPS27P27-201ENST00000498779 255 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 RNU1-95P-201ENST00000516357 160 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 RNU1-128P-201ENST00000516704 160 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 COPS8P3-201ENST00000526024 482 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AL391261.3-201ENST00000557194 520 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 CYCSP39-201ENST00000565821 309 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AC087499.8-201ENST00000578406 226 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 MIR4644-201ENST00000579929 84 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AC008121.1-201ENST00000603244 268 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AC010378.1-201ENST00000619270 362 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 AC110491.1-201ENST00000562191 2010 ntBASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA6Q9Y5G7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 MIR208A-201ENST00000362287 71 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 SNORA63.1-201ENST00000362493 131 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 RNA5SP399-201ENST00000364003 117 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 U1.1-201ENST00000384101 164 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 Y_RNA.474-201ENST00000384341 102 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 U8.11-201ENST00000384699 133 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 U8.12-201ENST00000384701 133 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 MIR1251-201ENST00000408552 70 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 RPS20P15-201ENST00000412792 311 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 ATG3P1-201ENST00000419507 911 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 FABP5P14-201ENST00000437273 393 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 HIGD1AP2-201ENST00000446367 280 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 U8.18-201ENST00000459285 133 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 RNU7-23P-201ENST00000459465 62 ntBASIC3.69□□□□□ -1.82
PCDHGA6Q9Y5G7 RPL23AP62-201ENST00000463396 453 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 279.5 ms