Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTDP1Q9Y5B0 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.15□□□□□ -1.74
CTDP1Q9Y5B0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.212-201ENST00000364177 102 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 SNORA23-201ENST00000365128 182 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-639P-201ENST00000384074 107 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 SNORD70.1-201ENST00000391007 85 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 MIR450B-201ENST00000401182 78 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 BX682237.1-201ENST00000415016 335 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AC004866.2-201ENST00000438285 481 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AF228730.2-201ENST00000438784 848 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 RPL30P15-201ENST00000457129 321 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 SNORA70.18-201ENST00000516696 98 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 SNRPGP18-201ENST00000553000 214 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 ATP1B3P1-201ENST00000605365 821 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AC009570.1-201ENST00000609599 745 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AL450472.3-201ENST00000615578 367 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AF117829.1-206ENST00000621883 3802 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 AP003355.3-201ENST00000623465 114 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTDP1Q9Y5B0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-525P-201ENST00000363685 104 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-1188P-201ENST00000363795 107 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 SNORA22B-201ENST00000383876 138 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 SNORD116-11-201ENST00000383882 92 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.459-201ENST00000384251 102 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.482-201ENST00000384377 111 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AC110754.1-201ENST00000399740 601 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 RPL7P10-201ENST00000417407 739 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 MTND3P2-201ENST00000438452 342 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AL121871.1-201ENST00000443413 436 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 RPL32P28-201ENST00000443577 397 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 MTND1P17-201ENST00000448961 204 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 DYNLL1P5-201ENST00000467158 270 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AC025518.1-201ENST00000479856 347 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 TBCAP3-201ENST00000512475 312 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AC018630.1-201ENST00000541376 925 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 MIR3671-201ENST00000580455 88 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AC136443.5-201ENST00000603741 370 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 U4.6-201ENST00000621618 127 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 MTND5P10-201ENST00000603719 1809 ntBASIC4.14□□□□□ -1.75
CTDP1Q9Y5B0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-601P-201ENST00000384540 107 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 MIR491-201ENST00000384877 84 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 MIR483-201ENST00000385070 76 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-712P-201ENST00000410558 100 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 SKA2P1-201ENST00000425592 390 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 NEFMP1-201ENST00000443423 1006 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC104058.1-201ENST00000448028 297 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC008526.1-201ENST00000509149 338 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 MTCYBP40-201ENST00000509390 1135 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 MIR3941-201ENST00000582572 103 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC004696.1-201ENST00000614345 607 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AL110115.1-201ENST00000614396 364 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC133104.2-201ENST00000615272 193 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 uc_338.22-201ENST00000622722 187 ntBASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTDP1Q9Y5B0 AC110774.1-201ENST00000623567 2018 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.31-201ENST00000362574 102 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms