Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DLEU2_6.2-201ENST00000620994 136 ntBASIC2□□□□□ -2.09
KCNIP3Q9Y2W7 MIR6810-201ENST00000622701 70 ntBASIC2□□□□□ -2.09
KCNIP3Q9Y2W7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KCNIP3Q9Y2W7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2□□□□□ -2.09
KCNIP3Q9Y2W7 MTND4P1-201ENST00000457501 1466 ntBASIC2□□□□□ -2.09
KCNIP3Q9Y2W7 RNU1-72P-201ENST00000362976 153 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 MIR134-201ENST00000385258 73 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 MRPL42P2-201ENST00000403169 426 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 CIR1P3-201ENST00000405137 479 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC007283.2-201ENST00000424739 197 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AL356583.2-201ENST00000426536 280 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 USP9YP15-201ENST00000442391 422 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 USP9YP12-201ENST00000450481 570 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC117503.1-201ENST00000472241 394 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 RPL7P43-201ENST00000478876 753 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC011005.2-201ENST00000487324 359 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AF213884.2-201ENST00000510417 903 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 RNU5B-3P-201ENST00000516601 115 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 SNORA67.7-201ENST00000516664 135 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC022878.1-201ENST00000530684 149 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC105137.2-201ENST00000569073 466 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 MIR4760-201ENST00000585040 80 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 HMGN1P30-201ENST00000589286 268 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 BNIP3P33-201ENST00000598912 569 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 APOOP1-201ENST00000604695 592 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AL121917.1-203ENST00000605534 577 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AL451064.1-201ENST00000607718 471 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC067747.1-201ENST00000608026 250 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AL359547.2-201ENST00000615810 418 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC009233.1-201ENST00000616477 371 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC006133.1-201ENST00000617106 264 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 U4atac.1-201ENST00000618345 95 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AP003400.5-201ENST00000624827 617 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 AC103710.2-202ENST00000641454 2853 ntBASIC1.99□□□□□ -2.09
KCNIP3Q9Y2W7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 ZNF720P1-201ENST00000562403 1939 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 RNU5E-1-201ENST00000362477 120 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 RNU5F-7P-201ENST00000363696 115 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 SNORA3A-201ENST00000364113 130 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 RNU6-39P-201ENST00000384344 107 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 MIR1302-8-201ENST00000408342 128 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 NUP35P1-201ENST00000422734 947 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AL589872.1-201ENST00000426602 288 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 UBE2D3P1-201ENST00000436669 444 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 RPS24P1-201ENST00000438550 371 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 MTND1P22-201ENST00000510572 951 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 MIR514B-201ENST00000516774 80 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 CBX3P7-201ENST00000532876 502 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 ZNF321P-202ENST00000550843 495 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AL670379.10-201ENST00000604330 253 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AL670379.9-201ENST00000605428 253 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AC087045.1-201ENST00000605856 382 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AC093732.2-201ENST00000607950 274 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AC010378.1-201ENST00000619270 362 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AC024940.5-201ENST00000622889 474 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AC079248.2-201ENST00000623779 326 ntBASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.98□□□□□ -2.09
KCNIP3Q9Y2W7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 RNU5A-2P-201ENST00000384337 116 ntBASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AL360182.1-201ENST00000397433 468 ntBASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 FTH1P15-201ENST00000406984 280 ntBASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AL135938.1-201ENST00000443141 297 ntBASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 FABP5P13-201ENST00000452144 328 ntBASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AL583843.1-201ENST00000456070 346 ntBASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AC078814.3-201ENST00000553036 491 ntBASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AL138976.2-201ENST00000563989 694 ntBASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.97□□□□□ -2.09
KCNIP3Q9Y2W7 AL138963.2-201ENST00000605137 226 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms