Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 RPS4XP3-201ENST00000398541 413 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 RAP1BP3-201ENST00000407180 549 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 RPS12P24-201ENST00000412619 387 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AL513185.2-201ENST00000425543 193 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 YME1L1P1-201ENST00000429435 297 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 MTND4LP16-201ENST00000440828 295 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AL590664.1-201ENST00000448065 339 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 RPS15AP27-201ENST00000449183 343 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 PRSS3P4-201ENST00000453323 162 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 SNRPFP3-201ENST00000457792 225 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 RPL21P99-201ENST00000480369 423 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 FAM206BP-201ENST00000510179 541 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 TTC39CP1-201ENST00000512513 755 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC008549.1-201ENST00000512900 643 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-1314P-201ENST00000517139 104 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-840P-201ENST00000517275 65 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 PSMA3P-201ENST00000555485 635 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC013553.2-201ENST00000604244 589 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC022893.3-201ENST00000607665 437 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AL355365.1-201ENST00000616480 294 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 uc_338.34-201ENST00000617467 174 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 AC100810.6-201ENST00000638068 285 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 MTCO1P12-201ENST00000414273 1543 ntBASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
MRPS28Q9Y2Q9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-371P-201ENST00000364283 108 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 SNORD81.2-201ENST00000365153 76 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-1027P-201ENST00000383998 107 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-767P-201ENST00000384132 107 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 SNORA1.3-201ENST00000384676 136 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 U3.19-201ENST00000390893 196 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 SNORA16.2-201ENST00000390991 127 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 MIR887-201ENST00000401258 79 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AL606923.1-201ENST00000406616 190 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 RN7SKP123-201ENST00000410732 291 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AL451062.2-201ENST00000427515 271 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC005019.1-201ENST00000436455 431 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 RPS12P18-201ENST00000442381 270 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 PRDX3P3-201ENST00000447765 522 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-1038P-201ENST00000516516 104 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 BNIP3P6-201ENST00000549284 499 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC011611.1-201ENST00000552179 197 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 OR11H5P-201ENST00000554039 926 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC074050.1-201ENST00000563247 211 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 MIR2682-201ENST00000580305 110 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC106900.2-201ENST00000604994 317 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 MIR15A-201ENST00000607334 83 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AL138880.2-201ENST00000616214 239 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC009248.2-201ENST00000619826 254 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 U6.114-201ENST00000636407 96 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 MTND4P12-201ENST00000498999 1377 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 MTND4P35-201ENST00000604257 1375 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 AC091564.4-201ENST00000533934 2194 ntBASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.7□□□□□ -1.98
MRPS28Q9Y2Q9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 AC121333.1-201ENST00000567488 2709 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 AC008264.2-201ENST00000610193 3731 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-1287P-201ENST00000362914 107 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-799P-201ENST00000363567 107 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-288P-201ENST00000363690 104 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 Y_RNA.263-201ENST00000364659 114 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 RNU4-66P-201ENST00000365199 138 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-190P-201ENST00000384154 102 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 RNU6-1060P-201ENST00000384664 107 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 CISD1P1-201ENST00000393907 327 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 AL160275.3-201ENST00000423876 471 ntBASIC2.69□□□□□ -1.98
MRPS28Q9Y2Q9 RPL27AP8-201ENST00000424277 446 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms