Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 NRON-201ENST00000517270 370 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 RANP3-201ENST00000530970 276 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 GTF3AP2-201ENST00000557014 266 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AC073308.1-201ENST00000623696 305 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AL021368.2-201ENST00000606125 5352 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 NACAP2-201ENST00000318548 624 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 MIR325-201ENST00000385260 98 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 SNORD37.1-201ENST00000390968 65 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 RNU6-817P-201ENST00000391083 104 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 RNU6-373P-201ENST00000411247 98 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC012498.1-201ENST00000424037 437 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC022018.1-201ENST00000430685 241 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 Z82210.1-201ENST00000440037 231 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC073415.1-201ENST00000449240 153 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 MTND3P10-201ENST00000450967 341 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 RPL37P6-201ENST00000460682 294 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC010401.1-201ENST00000463867 348 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 RPS29P26-201ENST00000477483 171 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AL135752.1-201ENST00000479477 471 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC083906.5-201ENST00000503722 328 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 RNA5SP367-201ENST00000516557 118 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC008945.2-201ENST00000606056 604 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC011155.2-201ENST00000623202 216 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 AC004944.1-201ENST00000517807 3059 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 MTND4P14-201ENST00000435799 1354 ntBASIC4.78□□□□□ -1.64
CDK11AQ9UQ88 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AC010680.1-201ENST00000590024 3590 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RNU6-1287P-201ENST00000362914 107 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 SNORD115-7-201ENST00000365306 82 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RNU6-198P-201ENST00000384258 104 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RNU6-1060P-201ENST00000384664 107 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 SNORD67-201ENST00000390833 111 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 Y_RNA.604-201ENST00000410574 102 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RNU6-55P-201ENST00000411092 107 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RNU6-954P-201ENST00000411355 107 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 MTCYBP8-201ENST00000422855 651 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 HMGB3P11-201ENST00000440127 604 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RPS29P12-201ENST00000460178 152 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RPS20P22-201ENST00000473700 357 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RPS29P25-201ENST00000481709 171 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AC069439.1-201ENST00000494739 167 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AC104806.1-201ENST00000508720 308 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RNU6-927P-201ENST00000516199 100 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 RN7SKP219-201ENST00000516825 296 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 OR5B19P-201ENST00000531766 928 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 ADI1P3-201ENST00000549509 470 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 HIF1AP1-201ENST00000553642 175 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 TRAV28-201ENST00000557548 323 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 MIR4703-201ENST00000577728 79 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AC002545.1-201ENST00000592511 181 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AL359547.2-201ENST00000615810 418 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDK11AQ9UQ88 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AC092435.3-201ENST00000565538 3654 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 RNU6-451P-201ENST00000362921 107 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AP002088.1-201ENST00000382740 395 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 RNU6-190P-201ENST00000384154 102 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 OR9R1P-201ENST00000412200 877 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AL135938.1-201ENST00000443141 297 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 RN7SL442P-201ENST00000473804 320 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 RN7SL429P-201ENST00000479090 223 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 RN7SL489P-201ENST00000486185 223 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms