Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.09□□□□□ -1.59
NXF1Q9UBU9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.09□□□□□ -1.59
NXF1Q9UBU9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NXF1Q9UBU9 AC007529.1-201ENST00000418574 2178 ntBASIC5.09□□□□□ -1.59
NXF1Q9UBU9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NXF1Q9UBU9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
NXF1Q9UBU9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
NXF1Q9UBU9 AC068647.1-201ENST00000489539 2265 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 AL590240.1-201ENST00000334118 313 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 Y_RNA.35-201ENST00000362601 101 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 RNA5SP197-201ENST00000363357 119 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 Y_RNA.534-201ENST00000384599 112 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 RNA5SP213-201ENST00000391031 106 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 BX510359.2-201ENST00000417920 305 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 AL117339.3-201ENST00000418733 162 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 CKS1BP6-201ENST00000424932 240 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 COX6B1P7-201ENST00000430845 235 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 RPL36AP41-201ENST00000493820 306 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 SNORA31.3-201ENST00000516029 96 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 SNORD33.1-201ENST00000516213 88 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 AC023575.1-201ENST00000580510 358 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 SRGNP1-201ENST00000603392 451 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 AL034351.1-201ENST00000605288 668 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 AL355816.1-201ENST00000607951 118 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 AL672167.1-205ENST00000641112 3080 ntBASIC5.08□□□□□ -1.6
NXF1Q9UBU9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NXF1Q9UBU9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 RNU6-1180P-201ENST00000364935 107 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 RNU4-9P-201ENST00000364951 139 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 RNU6-213P-201ENST00000384051 104 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 RNU6-905P-201ENST00000384434 107 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 AL590139.1-201ENST00000416267 400 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 AC016831.4-201ENST00000438302 307 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 RNA5SP103-201ENST00000459503 118 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 AP000870.1-201ENST00000472927 406 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 AC022493.1-201ENST00000492984 337 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 AC005912.1-201ENST00000495392 255 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 RNU6-772P-201ENST00000516042 105 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 Y_RNA.685-201ENST00000516532 108 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 AC100767.1-201ENST00000528178 123 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 MIR3145-201ENST00000580727 82 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 AC083809.1-201ENST00000615051 472 ntBASIC5.07□□□□□ -1.6
NXF1Q9UBU9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NXF1Q9UBU9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AC097461.1-201ENST00000568928 2821 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 CUL1P1-201ENST00000509510 2425 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 RNU6-227P-201ENST00000362865 103 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 SNORA70.2-201ENST00000364506 135 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 Y_RNA.294-201ENST00000364916 102 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 UBBP2-201ENST00000376781 231 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 SNORD116-21-201ENST00000384507 92 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 Y_RNA.558-201ENST00000384685 113 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AL590762.2-201ENST00000395798 571 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 MIR298-201ENST00000401212 88 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AL592148.1-201ENST00000413568 445 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 OR2AH1P-201ENST00000425717 928 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AC011753.3-201ENST00000443436 406 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 RN7SKP49-201ENST00000516675 260 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 RN7SKP258-201ENST00000517151 304 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 MIR6758-201ENST00000620653 63 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 AL354798.1-201ENST00000622505 329 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms