Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNU1-107P-201ENST00000516617 154 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-699P-201ENST00000517081 110 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AC007991.1-201ENST00000522680 631 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 IGKV2D-19-201ENST00000523346 262 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 SUB1P3-201ENST00000564581 315 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AC090132.2-201ENST00000615881 347 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 SNORD39.4-201ENST00000620099 78 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AC068724.3-201ENST00000625906 87 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 Y_RNA.151-201ENST00000363566 112 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 Y_RNA.473-201ENST00000384333 102 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 Y_RNA.496-201ENST00000384444 101 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 MTCYBP9-201ENST00000431021 303 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC087650.1-201ENST00000431445 468 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC011742.1-201ENST00000431448 434 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC083863.1-201ENST00000438811 231 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 IPO7P1-201ENST00000442031 636 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 RPL7P5-201ENST00000471472 736 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 RPL31P61-201ENST00000496160 376 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 MTCO2P24-201ENST00000515611 426 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 Y_RNA.661-201ENST00000516003 99 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 RNA5SP384-201ENST00000516615 116 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC104576.1-201ENST00000524225 88 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 OR8R1P-201ENST00000543943 764 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 YPEL5P3-201ENST00000547227 352 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 MIR3160-1-201ENST00000577972 85 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC093227.2-201ENST00000589357 285 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AL645944.1-201ENST00000603857 493 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC006157.1-201ENST00000611750 366 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC007485.1-201ENST00000616755 206 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 AC007256.1-201ENST00000392253 2765 ntBASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PPARGC1AQ9UBK2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 FAM35DP-201ENST00000323387 2712 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AC008568.2-201ENST00000623862 2313 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 RNA5SP399-201ENST00000364003 117 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-331P-201ENST00000384724 107 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 SNORD73A-201ENST00000386062 65 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-174P-201ENST00000410406 106 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AC243428.1-201ENST00000421099 264 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AC008571.1-201ENST00000467232 300 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AC128713.1-201ENST00000471495 306 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AC018437.1-201ENST00000492214 406 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 SNORA70.16-201ENST00000516390 95 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 MIR2114-201ENST00000516645 80 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 RNA5SP468-201ENST00000516782 93 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 RNA5SP143-201ENST00000516936 115 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 RNA5SP290-201ENST00000517133 127 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AC109446.1-201ENST00000566172 220 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AL732372.2-225ENST00000642124 456 ntBASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PPARGC1AQ9UBK2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms