Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.09□□□□□ -2.08
KLHL28Q9NXS3 MTND4P16-201ENST00000466108 1367 ntBASIC2.09□□□□□ -2.08
KLHL28Q9NXS3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 Y_RNA.46-201ENST00000362695 102 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 RN7SKP192-201ENST00000411291 327 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 RPS12P24-201ENST00000412619 387 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 ELOCP17-201ENST00000414751 326 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AL139415.2-201ENST00000431968 163 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AL441985.1-201ENST00000457727 251 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 RNU6-953P-201ENST00000459154 107 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC004263.1-201ENST00000479327 332 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC109486.1-201ENST00000486833 374 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 HSPE1P23-201ENST00000509838 286 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC023050.2-201ENST00000544968 387 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 MTND4P33-201ENST00000556706 766 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 MIR3146-201ENST00000580367 79 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC112187.2-201ENST00000604345 283 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AL138963.2-201ENST00000605137 226 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AC013244.3-201ENST00000605614 388 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AP003400.5-201ENST00000624827 617 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 AP006437.1-201ENST00000641440 3685 ntBASIC2.08□□□□□ -2.08
KLHL28Q9NXS3 TEX21P-201ENST00000447107 1476 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 Z75746.1-201ENST00000440243 2080 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 RNU6-288P-201ENST00000363690 104 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 OR5H15-201ENST00000383696 930 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 MIR513B-201ENST00000385136 84 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 SNORA46.1-201ENST00000391069 153 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 BTF3P7-201ENST00000407097 488 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC097463.2-201ENST00000421074 142 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 SNORD97-201ENST00000459187 142 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 snoU13.26-201ENST00000459452 105 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC018437.1-201ENST00000492214 406 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 CKS1BP2-201ENST00000497342 240 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC116655.1-201ENST00000508324 901 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 SMURF2P1-201ENST00000514992 481 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 ACA59.2-201ENST00000517061 156 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 SNORA31.25-201ENST00000517242 134 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 MTND2P32-201ENST00000521584 1038 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC078899.2-201ENST00000595282 212 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC009233.1-201ENST00000616477 371 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AC021755.4-201ENST00000616620 456 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 AL162373.1-201ENST00000620433 407 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 Z99571.1-201ENST00000636677 394 ntBASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
KLHL28Q9NXS3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 Y_RNA.302-201ENST00000364997 102 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 RNY3P13-201ENST00000365542 102 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 RNU2-63P-201ENST00000410792 194 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 RNU2-62P-201ENST00000410868 191 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 RPS24P7-201ENST00000416921 246 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 DPH3P2-201ENST00000422618 250 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 HMGB3P12-201ENST00000438745 556 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 MTND1P3-201ENST00000484956 952 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 RPL36AP48-201ENST00000485521 314 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 RPL23AP49-201ENST00000492925 468 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 RNU6-572P-201ENST00000516724 80 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC025755.1-201ENST00000521306 278 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms