Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNA5SP164-201ENST00000516533 110 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AC009643.1-201ENST00000532030 391 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 MIR4425-201ENST00000580572 84 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AC113139.1-201ENST00000605049 239 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AC245389.1-201ENST00000605141 529 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-6P-201ENST00000606623 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AC010680.1-201ENST00000590024 3590 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 RNU4-79P-201ENST00000362764 141 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 SNORA56-201ENST00000383966 129 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 RNU6-72P-201ENST00000384285 79 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 MIR518D-201ENST00000385014 87 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 SNORD73A-201ENST00000386062 65 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 RNA5SP424-201ENST00000390988 115 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 U3.22-201ENST00000391120 215 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 SNORD56-201ENST00000413522 71 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC016831.2-201ENST00000417179 352 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AL590632.1-201ENST00000424289 371 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 CYCSP32-201ENST00000440548 321 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 snoU109.2-201ENST00000459316 135 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC130509.1-201ENST00000464158 433 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC128713.1-201ENST00000471495 306 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC105137.1-201ENST00000484355 562 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 RPS27P27-201ENST00000498779 255 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC096745.1-201ENST00000509945 370 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC093840.1-201ENST00000511599 336 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 RN7SKP24-201ENST00000515888 284 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 MIR4284-201ENST00000578924 81 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AC008121.1-201ENST00000603244 268 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 ELOCP5-201ENST00000604924 333 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 MIR6748-201ENST00000610433 71 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 AL445567.2-201ENST00000618935 498 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.72□□□□□ -1.81
MKS1Q9NXB0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
MKS1Q9NXB0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
MKS1Q9NXB0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RNA5SP42-201ENST00000364278 115 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RNA5SP130-201ENST00000364431 114 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RNU6-898P-201ENST00000365627 104 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.384-201ENST00000383909 102 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.535-201ENST00000384612 99 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RNU6-95P-201ENST00000384697 107 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RNA5SP252-201ENST00000391131 119 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 U3.37-201ENST00000408528 213 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RNU4-6P-201ENST00000410804 122 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RPL37P10-201ENST00000412884 288 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 BPY2DP-201ENST00000422208 265 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RPL18P10-201ENST00000425606 538 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 GOT2P5-201ENST00000433995 546 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 RPS3AP52-201ENST00000435639 297 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 UBE2V1P7-201ENST00000446395 340 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.635-201ENST00000459041 101 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 AP006245.1-201ENST00000522549 120 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 MIR4277-201ENST00000578298 84 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 MIR3138-201ENST00000585238 82 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 HMGN2P15-201ENST00000585707 270 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 AL606490.9-201ENST00000603331 271 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 AP000787.2-201ENST00000604432 568 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 MIR6134-201ENST00000617606 109 ntBASIC3.71□□□□□ -1.82
MKS1Q9NXB0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MKS1Q9NXB0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC110491.1-201ENST00000562191 2010 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms