Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC096745.1-201ENST00000509945 370 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 RNU6-397P-201ENST00000516226 104 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 SNORA40.14-201ENST00000516543 86 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 RNU6-255P-201ENST00000516957 105 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 PRO1804-201ENST00000623780 2050 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG3Q9NT62 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG3Q9NT62 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATG3Q9NT62 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG3Q9NT62 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG3Q9NT62 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 AC008669.1-201ENST00000565823 2178 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG3Q9NT62 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 Y_RNA.105-201ENST00000363182 111 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 Y_RNA.274-201ENST00000364714 101 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 RNU4-42P-201ENST00000364738 142 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 SNORD82-201ENST00000365530 70 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 Y_RNA.551-201ENST00000384661 102 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 RNU6-387P-201ENST00000411331 105 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 AC092436.3-201ENST00000511788 257 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 Y_RNA.700-201ENST00000516806 100 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 RANP3-201ENST00000530970 276 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 AC008162.1-201ENST00000604718 254 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 AL670379.4-201ENST00000605279 254 ntBASIC4.94□□□□□ -1.62
ATG3Q9NT62 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG3Q9NT62 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
ATG3Q9NT62 RNU6-1159P-201ENST00000362933 107 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 RNVU1-3-201ENST00000364313 161 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 RNU6-715P-201ENST00000365204 103 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
ATG3Q9NT62 MT-TC-201ENST00000387405 66 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.93□□□□□ -1.62
ATG3Q9NT62 EZH2P1-201ENST00000431167 291 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 AC127537.2-201ENST00000439258 465 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 HMGB1P37-201ENST00000439613 609 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 FCF1P4-201ENST00000448326 183 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 RNU7-187P-201ENST00000458985 68 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 MED28P2-201ENST00000475771 317 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 RN7SKP18-201ENST00000516005 275 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 RNU6-307P-201ENST00000516743 106 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 RNU6-897P-201ENST00000517135 105 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 IGKV2-38-201ENST00000517443 247 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 AC022868.1-201ENST00000517767 391 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 AC025423.5-201ENST00000550230 219 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.93□□□□□ -1.62
ATG3Q9NT62 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG3Q9NT62 AC011266.1-201ENST00000624119 3569 ntBASIC4.93□□□□□ -1.62
ATG3Q9NT62 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ATG3Q9NT62 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG3Q9NT62 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG3Q9NT62 AL049781.1-201ENST00000623195 3585 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG3Q9NT62 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG3Q9NT62 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 Y_RNA.29-201ENST00000362570 113 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 Y_RNA.151-201ENST00000363566 112 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 Y_RNA.270-201ENST00000364693 104 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 SMIM11P1-201ENST00000369586 178 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 Y_RNA.416-201ENST00000384014 113 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 RNU6-339P-201ENST00000384310 107 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 RNU6-1156P-201ENST00000410365 100 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 ATP5A1P2-201ENST00000412323 255 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 OR2AQ1P-201ENST00000451972 200 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 MTCO3P8-201ENST00000453691 755 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 AL139109.1-201ENST00000455491 297 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 LINC01399-202ENST00000458450 244 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms