Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC134050.1-201ENST00000495088 933 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 RNU6-581P-201ENST00000516214 105 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 DEFB108A-201ENST00000530110 222 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AC013828.2-201ENST00000532487 235 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AL592221.1-201ENST00000605266 382 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AC097478.2-201ENST00000610572 514 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AC087241.4-201ENST00000612441 480 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 uc_338.14-201ENST00000613162 166 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 MIR6715A-201ENST00000615929 79 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AC099654.9-201ENST00000637055 678 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AL445984.1-201ENST00000637834 659 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 MTND4P9-201ENST00000507819 1346 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AL359854.1-201ENST00000614203 1594 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AC103710.2-202ENST00000641454 2853 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 HSPA8P4-201ENST00000511877 1920 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 RNU6-486P-201ENST00000363116 107 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 RNU6-253P-201ENST00000384730 105 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 MIR620-201ENST00000385232 95 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 PTGES3P4-201ENST00000426243 356 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 ISCA1P1-201ENST00000426679 387 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AP001324.2-201ENST00000461163 319 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 YWHAEP4-201ENST00000505390 198 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 SNORA25.11-201ENST00000515935 105 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 RNA5SP112-201ENST00000515937 99 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 MIR544B-201ENST00000582372 78 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 MIR4293-201ENST00000584305 78 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 VN1R82P-201ENST00000601481 356 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 RNU4-5P-201ENST00000607255 135 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AP000484.1-201ENST00000620067 1252 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AL359757.2-201ENST00000624309 274 ntBASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.11
TREX1Q9NSU2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 RNU4-26P-201ENST00000410270 107 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 RNU6-757P-201ENST00000410334 100 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 RNU2-63P-201ENST00000410792 194 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL030996.1-201ENST00000411430 235 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 PIGPP2-201ENST00000411569 458 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 RPS24P7-201ENST00000416921 246 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 XKRYP1-201ENST00000423438 492 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 XKRYP2-201ENST00000432915 492 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 USP9YP24-201ENST00000434374 697 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 USP9YP17-201ENST00000444617 696 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AC092001.1-201ENST00000453012 261 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AC108059.3-201ENST00000456388 214 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 FCF1P6-201ENST00000456841 595 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 HMGB3P17-201ENST00000504195 649 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 RNU2-44P-201ENST00000516795 194 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 RNU6-143P-201ENST00000516942 93 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 RNU6-703P-201ENST00000516946 107 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 CBX3P7-201ENST00000532876 502 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 ROCK1P1-201ENST00000573767 549 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 NRBF2P1-201ENST00000587407 859 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL391001.1-201ENST00000602747 715 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL109918.3-201ENST00000603072 338 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 MTCYBP22-201ENST00000603788 447 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL109620.1-201ENST00000618738 1197 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms