Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RPS29P2-201ENST00000479278 136 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 AC018437.1-201ENST00000492214 406 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 MTND3P25-201ENST00000509243 135 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 RN7SKP18-201ENST00000516005 275 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.668-201ENST00000516233 93 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 RNU6-388P-201ENST00000517012 105 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 RNU6-389P-201ENST00000517048 105 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 AC069113.1-201ENST00000517763 267 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 HSBP1P1-201ENST00000555205 166 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 MIR5692A1-201ENST00000580523 69 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 AC107871.2-201ENST00000612894 502 ntBASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM7Q9NR12 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 SCN1A-220ENST00000641603 12506 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 USP8P1-201ENST00000494673 3183 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 RNA5SP267-201ENST00000364893 126 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.314-201ENST00000365114 102 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 RNU6-629P-201ENST00000384061 103 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 SNORD73A-201ENST00000386062 65 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 RNU6-882P-201ENST00000391025 103 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 RPL21P66-201ENST00000426566 466 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 HMGB1P27-201ENST00000431429 603 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC011816.1-201ENST00000441346 546 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 PCMTD1P1-201ENST00000455560 355 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC112492.4-201ENST00000456549 352 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 BX510359.1-201ENST00000456973 237 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC104564.1-201ENST00000493028 407 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC105758.1-201ENST00000506038 399 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 RNU6-914P-201ENST00000516749 109 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 RNU6-1073P-201ENST00000517182 106 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 SUB1P3-201ENST00000564581 315 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC244505.7-201ENST00000599675 272 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC062037.2-201ENST00000610137 73 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AL031601.2-202ENST00000622650 282 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM7Q9NR12 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 RNU2-71P-201ENST00000411395 189 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AL158156.1-201ENST00000422509 473 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AL360271.2-201ENST00000447710 161 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 snoU13.4-201ENST00000458916 104 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AC008571.1-201ENST00000467232 300 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 RPL22P13-201ENST00000493291 347 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AC114801.2-201ENST00000503825 781 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 HMGB1P22-201ENST00000505315 124 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 FTH1P9-201ENST00000513251 355 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 RNU1-103P-201ENST00000516502 125 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AP005902.1-201ENST00000521358 186 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AC131281.1-201ENST00000522984 164 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 SNRPGP16-201ENST00000533275 226 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 GNRHR2P1-201ENST00000555315 631 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 MIR5187-201ENST00000583479 76 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 AL355297.3-201ENST00000604082 446 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PDLIM7Q9NR12 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AL049781.1-201ENST00000623195 3585 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.210-201ENST00000364161 110 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.380-201ENST00000365663 111 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 MIR93-201ENST00000385024 80 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms