Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 FCF1P10-201ENST00000407590 479 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 RNU4-53P-201ENST00000410828 140 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 HMGB1P27-201ENST00000431429 603 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AL451074.3-201ENST00000437709 472 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 RPL22P17-201ENST00000438729 315 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC118469.1-201ENST00000442943 488 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 RPL37P6-201ENST00000460682 294 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC118465.1-201ENST00000513820 1271 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 MIR892C-201ENST00000516410 77 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 RN7SKP265-201ENST00000516448 223 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 ZNF519P3-201ENST00000557158 1032 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 MIR3118-1-201ENST00000581787 76 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC234772.3-201ENST00000602277 528 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC112187.2-201ENST00000604345 283 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AC105129.3-201ENST00000605455 485 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 AL161423.1-201ENST00000613700 262 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 PISRT1-201ENST00000626175 531 ntBASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
EXOSC4Q9NPD3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 ADAM3A-203ENST00000461344 2157 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 SNORA11.4-201ENST00000408823 129 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 ZNF90P2-204ENST00000419323 1075 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 RPS27AP14-201ENST00000422868 454 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC027124.2-201ENST00000428249 105 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC055731.1-201ENST00000474387 401 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC022493.1-201ENST00000492984 337 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 RNU6-581P-201ENST00000516214 105 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 SNORA31.25-201ENST00000517242 134 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 SNRPGP18-201ENST00000553000 214 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AL133241.1-201ENST00000556832 487 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AL138976.2-201ENST00000563989 694 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 MIR3167-201ENST00000579623 85 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC105245.1-201ENST00000581934 244 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AL358072.1-201ENST00000604156 575 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC069294.1-201ENST00000608397 350 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AP001486.3-201ENST00000615334 372 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AL162373.1-201ENST00000620433 407 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC091953.2-201ENST00000623979 160 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 AC006020.1-201ENST00000420179 1854 ntBASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
EXOSC4Q9NPD3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 NACAP2-201ENST00000318548 624 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 RNU6-188P-201ENST00000364207 107 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 SMIM11P1-201ENST00000369586 178 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 CIR1P3-201ENST00000405137 479 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 RPS12P24-201ENST00000412619 387 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 RPL26P27-201ENST00000414397 437 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 MTND2P9-201ENST00000422293 931 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 RAC1P6-201ENST00000423911 575 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 EIF4EP4-201ENST00000424916 578 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 HMGN2P10-201ENST00000448085 265 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 RNU6-703P-201ENST00000516946 107 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AC022616.6-201ENST00000520479 119 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 AC006199.1-201ENST00000548728 219 ntBASIC1.8□□□□□ -2.12
EXOSC4Q9NPD3 NACAP3-201ENST00000552100 481 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms