Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MTND1P3-201ENST00000484956 952 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 RNA5SP337-201ENST00000517007 109 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AP001646.1-201ENST00000527936 915 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC135628.1-201ENST00000568867 534 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 HMGN1P30-201ENST00000589286 268 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC005498.1-201ENST00000592125 465 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC026790.2-201ENST00000606282 430 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 SNORD14A-201ENST00000606526 91 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.91□□□□□ -2.1
HMG20AQ9NP66 DUSP12P1-201ENST00000612874 516 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC130324.3-201ENST00000614165 542 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC092140.2-201ENST00000618027 521 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC025034.2-201ENST00000623264 286 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC079248.2-201ENST00000623779 326 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC079416.3-201ENST00000624479 549 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 AC007494.3-201ENST00000624660 743 ntBASIC1.91□□□□□ -2.1
HMG20AQ9NP66 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.91□□□□□ -2.1
HMG20AQ9NP66 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
HMG20AQ9NP66 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
HMG20AQ9NP66 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
HMG20AQ9NP66 AL136360.1-201ENST00000503377 1900 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AP000568.1-201ENST00000282964 442 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 SNORA68.1-201ENST00000364537 132 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 RNU5E-5P-201ENST00000365379 116 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 RNU6-658P-201ENST00000384606 106 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 SNORA67.4-201ENST00000384688 142 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 RNU6-750P-201ENST00000390946 107 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 SNORD115.1-201ENST00000391109 76 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AL021407.1-201ENST00000404531 386 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 RPS12P24-201ENST00000412619 387 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AL353729.1-201ENST00000425044 720 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC098614.2-201ENST00000426040 255 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 MTND5P25-201ENST00000430499 799 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 MED14P1-201ENST00000430517 648 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AP001486.1-201ENST00000463339 476 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 SNORA31.6-201ENST00000516241 130 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 MTCYBP20-201ENST00000524239 1129 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AL031775.1-201ENST00000607014 887 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC063944.3-201ENST00000609969 533 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC091304.6-201ENST00000619761 202 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AF246928.1-201ENST00000623768 87 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 AC099654.13-201ENST00000639774 207 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.9□□□□□ -2.11
HMG20AQ9NP66 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.9□□□□□ -2.11
HMG20AQ9NP66 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 RNU6-39P-201ENST00000384344 107 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 MIR17-201ENST00000385012 84 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 RNU2-62P-201ENST00000410868 191 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 NPM1P11-201ENST00000417106 855 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AL589872.1-201ENST00000426602 288 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 HMGB1P27-201ENST00000431429 603 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 HMGB3P12-201ENST00000438745 556 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AL445567.1-201ENST00000439121 144 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 UBE2D3P4-201ENST00000441973 436 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 RPL30P6-201ENST00000475925 342 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC010587.1-201ENST00000505809 469 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 NDUFB4P2-201ENST00000509515 391 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC114781.4-201ENST00000513707 639 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 RPS3AP4-201ENST00000555161 764 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC106782.4-201ENST00000568264 210 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 MIR3915-201ENST00000578518 97 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC024619.4-201ENST00000580924 316 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC012065.4-201ENST00000602445 679 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC138749.5-201ENST00000611461 208 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AL589743.7-201ENST00000612637 233 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC122133.1-201ENST00000613964 233 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC116165.2-201ENST00000616705 206 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC243829.7-201ENST00000633081 225 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 Z99571.1-201ENST00000636677 394 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 AC010889.1-201ENST00000566193 2666 ntBASIC1.89□□□□□ -2.11
HMG20AQ9NP66 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms