Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RPL23AP45-201ENST00000476406 468 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 RPS29P19-201ENST00000479709 171 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 RNU6-1256P-201ENST00000516539 103 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 RNA5SP290-201ENST00000517133 127 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 AC109479.2-201ENST00000517842 174 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 AMZ2P1-203ENST00000565833 850 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 AC022655.2-201ENST00000577280 318 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 AL645944.1-201ENST00000603857 493 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 AP002826.1-201ENST00000608835 315 ntBASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.82□□□□□ -1.64
ZFYVE28Q9HCC9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 SNORD14B-201ENST00000364533 90 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 RNU6-335P-201ENST00000364563 113 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 SNORA20.1-201ENST00000364790 130 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 Y_RNA.483-201ENST00000384380 101 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 MIR491-201ENST00000384877 84 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 Z85995.1-201ENST00000415547 335 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AL159987.2-201ENST00000432754 307 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 RNU6-397P-201ENST00000516226 104 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 RNU6-897P-201ENST00000517135 105 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 MED28P6-201ENST00000558776 231 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AC090517.1-201ENST00000569307 266 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 MIR3128-201ENST00000581957 66 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AC096577.2-201ENST00000611455 153 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AC130454.1-201ENST00000622948 401 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AC009093.8-201ENST00000641769 292 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 AC116096.1-201ENST00000566804 2314 ntBASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZFYVE28Q9HCC9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 Y_RNA.14-201ENST00000362415 103 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 RNU4-70P-201ENST00000384579 139 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 NDUFB4P7-201ENST00000423198 363 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 Z74021.1-201ENST00000423610 407 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AL353748.1-201ENST00000440753 474 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AC110768.1-201ENST00000509222 400 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 SNORA74D-201ENST00000516404 141 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 Y_RNA.680-201ENST00000516441 93 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 RNA5SP360-201ENST00000516555 118 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 SNORA70.24-201ENST00000517233 118 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AC026403.1-201ENST00000518938 295 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AC025755.1-201ENST00000521306 278 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AC006064.5-201ENST00000541782 248 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 SNRPGP15-201ENST00000600149 222 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AC008121.1-201ENST00000603244 268 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 MIR7151-201ENST00000617477 60 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 AL136964.1-201ENST00000622038 2990 ntBASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
ZFYVE28Q9HCC9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 RNU1-83P-201ENST00000363426 164 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 RNU6-806P-201ENST00000365147 105 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 Y_RNA.471-201ENST00000384312 102 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 Y_RNA.515-201ENST00000384535 112 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 MIR34B-201ENST00000385076 84 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 MIR34A-201ENST00000385130 110 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 AL603908.1-201ENST00000406098 201 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 RN7SKP156-201ENST00000410308 342 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 RNU2-38P-201ENST00000410856 79 ntBASIC4.79□□□□□ -1.64
ZFYVE28Q9HCC9 HSPE1P12-201ENST00000412576 301 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms