Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 EPS15P1-201ENST00000448836 336 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 RNU7-125P-201ENST00000458760 62 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 RPS27AP10-201ENST00000496103 208 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC108210.2-201ENST00000503681 201 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC107222.1-201ENST00000510899 637 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 RNU6-1129P-201ENST00000515964 104 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 AP006587.4-201ENST00000526053 529 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RPAP3Q9H6T3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RPAP3Q9H6T3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 NRBF2P1-201ENST00000587407 859 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC060766.3-201ENST00000591442 263 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC027807.2-201ENST00000616099 408 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC009831.4-201ENST00000620744 325 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AL589994.2-201ENST00000621124 579 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 MIR6132-201ENST00000622083 109 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AP002791.1-201ENST00000623291 381 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 U2.21-201ENST00000637295 81 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC006927.3-201ENST00000638789 384 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2
RPAP3Q9H6T3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RPAP3Q9H6T3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 RNU5F-6P-201ENST00000362979 116 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 RNU6-778P-201ENST00000363269 103 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 RNU6-533P-201ENST00000384144 107 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 RNU2-68P-201ENST00000410878 191 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 BPY2DP-201ENST00000422208 265 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 AC104651.1-201ENST00000427559 735 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 AL512286.1-201ENST00000439244 400 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 MTND4P25-201ENST00000441039 533 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 NEFMP1-201ENST00000443423 1006 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 FABP5P15-201ENST00000453566 214 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 RPL37P6-201ENST00000460682 294 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 RPS27P27-201ENST00000498779 255 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 AC022616.6-201ENST00000520479 119 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 AC007363.1-201ENST00000604736 620 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 SNORD14A-201ENST00000606526 91 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 AC034229.4-201ENST00000607861 441 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 uc_338.12-201ENST00000616344 181 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 AC010378.1-201ENST00000619270 362 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 AC131159.1-201ENST00000621854 213 ntBASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
RPAP3Q9H6T3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AL596028.1-201ENST00000326971 197 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 RNU5F-7P-201ENST00000363696 115 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 Y_RNA.560-201ENST00000384689 102 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 SNORD23.1-201ENST00000408212 104 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 RNU2-62P-201ENST00000410868 191 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 RPS15AP12-201ENST00000419498 388 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 ISCA1P1-201ENST00000426679 387 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 HMGB1P27-201ENST00000431429 603 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AC023141.11-201ENST00000508864 202 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 MIR3118-1-201ENST00000581787 76 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AC121334.2-201ENST00000605387 271 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AC104010.1-201ENST00000616889 150 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AC091953.2-201ENST00000623979 160 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 AC092881.1-201ENST00000638218 2733 ntBASIC2.51□□□□□ -2.01
RPAP3Q9H6T3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPAP3Q9H6T3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPAP3Q9H6T3 AL021407.1-201ENST00000404531 386 ntBASIC2.5□□□□□ -2.01
RPAP3Q9H6T3 FCF1P10-201ENST00000407590 479 ntBASIC2.5□□□□□ -2.01
RPAP3Q9H6T3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.5□□□□□ -2.01
RPAP3Q9H6T3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.5□□□□□ -2.01
RPAP3Q9H6T3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.5□□□□□ -2.01
RPAP3Q9H6T3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms