Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 GPM6BP2-201ENST00000432046 144 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 GOT2P5-201ENST00000433995 546 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 AC236972.2-201ENST00000434979 310 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 NDUFB4P6-201ENST00000436819 366 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 GPM6BP1-201ENST00000446387 144 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 RPL21P23-201ENST00000446654 460 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS16Q9H269 RNU7-66P-201ENST00000459469 62 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 RPL30P5-201ENST00000494923 336 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS16Q9H269 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS16Q9H269 AC034105.4-201ENST00000568304 277 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 AC024619.4-201ENST00000580924 316 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 MIR3922-201ENST00000585192 84 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS16Q9H269 AL162713.1-201ENST00000604480 262 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 CTHRC1P1-201ENST00000605383 469 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 uc_338.11-201ENST00000619132 160 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 AC025034.2-201ENST00000623264 286 ntBASIC3.6□□□□□ -1.83
VPS16Q9H269 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
VPS16Q9H269 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS16Q9H269 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS16Q9H269 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS16Q9H269 CUL1P1-201ENST00000509510 2425 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS16Q9H269 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS16Q9H269 MIR369-201ENST00000362155 70 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 MIR148B-201ENST00000362252 99 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 Y_RNA.167-201ENST00000363735 109 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 RNU4-66P-201ENST00000365199 138 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 UBE2V1P2-201ENST00000397758 440 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 Z85995.1-201ENST00000415547 335 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 TMEM167AP1-201ENST00000423409 219 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS16Q9H269 RPS3AP52-201ENST00000435639 297 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 RPL23AP22-201ENST00000437556 453 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS16Q9H269 PRDX3P3-201ENST00000447765 522 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS16Q9H269 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS16Q9H269 Y_RNA.639-201ENST00000458981 102 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 RNU7-180P-201ENST00000459240 63 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS16Q9H269 AL160314.1-201ENST00000490836 438 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AC108078.2-201ENST00000510750 236 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 APOOP4-201ENST00000513530 597 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 RNA5SP217-201ENST00000515959 91 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS16Q9H269 AC026403.1-201ENST00000518938 295 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS16Q9H269 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS16Q9H269 FRG2DP-202ENST00000566967 323 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS16Q9H269 SNORA51-201ENST00000606420 132 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AL627309.6-201ENST00000606857 840 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS16Q9H269 AC090971.5-201ENST00000621102 293 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AC091903.1-201ENST00000624322 454 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS16Q9H269 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS16Q9H269 MTND5P42-201ENST00000637720 498 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 MTND4P27-201ENST00000450813 1354 ntBASIC3.59□□□□□ -1.83
VPS16Q9H269 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS16Q9H269 API5P2-201ENST00000397055 1498 ntBASIC3.59□□□□□ -1.84
VPS16Q9H269 AF117829.1-206ENST00000621883 3802 ntBASIC3.59□□□□□ -1.84
VPS16Q9H269 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS16Q9H269 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS16Q9H269 AC007785.2-201ENST00000598627 1916 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
VPS16Q9H269 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS16Q9H269 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS16Q9H269 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS16Q9H269 Y_RNA.100-201ENST00000363141 102 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 Y_RNA.315-201ENST00000365117 102 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 RNU6-61P-201ENST00000365528 109 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 Y_RNA.373-201ENST00000365600 103 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 RNU6-1029P-201ENST00000384109 107 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS16Q9H269 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS16Q9H269 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS16Q9H269 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS16Q9H269 GTF2IP13-201ENST00000438487 386 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 PRPS1P1-201ENST00000445305 876 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS16Q9H269 FABP5P13-201ENST00000452144 328 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS16Q9H269 AL162395.1-201ENST00000457882 422 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS16Q9H269 RNU6-1038P-201ENST00000516516 104 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS16Q9H269 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS16Q9H269 AC068657.1-201ENST00000520807 306 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS16Q9H269 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS16Q9H269 MIR5583-1-201ENST00000580941 59 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 MIR3942-201ENST00000585264 109 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 SNRPGP17-201ENST00000603780 214 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms