Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RNU6-560P-201ENST00000364007 108 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 RNU6-701P-201ENST00000384059 107 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 MIR491-201ENST00000384877 84 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AL023284.1-201ENST00000403956 276 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AL033519.2-201ENST00000403958 392 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 VN1R36P-201ENST00000414936 291 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 MTCO3P46-201ENST00000425787 232 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 USP9YP15-201ENST00000442391 422 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 RNA5SP182-201ENST00000516064 82 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 SNORA19.3-201ENST00000516165 130 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AP004607.1-201ENST00000524456 203 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 OR5B19P-201ENST00000531766 928 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 PSMA3P-201ENST00000555485 635 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AL078605.1-201ENST00000603529 500 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 BNIP3P19-201ENST00000605397 577 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AC087045.1-201ENST00000605856 382 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 AC091304.6-201ENST00000619761 202 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 LINC02211-204ENST00000642024 1070 ntBASIC1.33□□□□□ -2.2
NKX6-2Q9C056 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NKX6-2Q9C056 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC092125.1-201ENST00000562568 1995 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 RNU6-288P-201ENST00000363690 104 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 RNU6-413P-201ENST00000384115 107 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 SNORD116-12-201ENST00000384468 92 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 SNORA64-201ENST00000384674 134 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 MIR561-201ENST00000385216 97 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AL158823.1-201ENST00000418441 478 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC244636.1-201ENST00000421152 228 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 USP9YP24-201ENST00000434374 697 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 MTND4P25-201ENST00000441039 533 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 BRK1P2-201ENST00000442875 223 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC096638.1-201ENST00000444678 216 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 USP9YP10-201ENST00000454868 628 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC117503.1-201ENST00000472241 394 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC079395.1-201ENST00000510981 262 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC009902.1-201ENST00000519351 183 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AP006587.4-201ENST00000526053 529 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC084851.1-201ENST00000529105 249 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 DUXAP1-201ENST00000556632 463 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC107952.2-201ENST00000606048 486 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC092953.2-201ENST00000608000 699 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 uc_338.5-201ENST00000611839 155 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AL773524.1-201ENST00000614065 229 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AC008121.3-201ENST00000618726 433 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AL121895.2-201ENST00000619558 447 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AL136360.1-201ENST00000503377 1900 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.32□□□□□ -2.2
NKX6-2Q9C056 AP000776.1-201ENST00000530032 1663 ntBASIC1.32□□□□□ -2.2
NKX6-2Q9C056 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 RNU2-2P-201ENST00000410396 191 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC127391.1-201ENST00000411737 98 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 OR9R1P-201ENST00000412200 877 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC007098.1-201ENST00000420122 367 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.31□□□□□ -2.2
NKX6-2Q9C056 NEFMP1-201ENST00000443423 1006 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 FAM103A2P-201ENST00000444122 354 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 BTF3P15-201ENST00000455606 336 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 RPL9P6-201ENST00000492764 598 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 FAM92A1P2-202ENST00000504766 877 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC117522.2-201ENST00000510049 657 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 AC109445.1-201ENST00000512356 383 ntBASIC1.31□□□□□ -2.2
NKX6-2Q9C056 RNU6-276P-201ENST00000516114 96 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms