Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 DAP3P1-201ENST00000441522 278 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 FTH1P25-201ENST00000447665 469 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC010099.1-201ENST00000455434 375 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AL132838.2-201ENST00000492041 314 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 PTP4A1P4-201ENST00000512479 322 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 MIR2116-201ENST00000517221 80 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AP003072.1-201ENST00000531740 145 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC063950.1-201ENST00000552036 308 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC020661.2-201ENST00000560114 134 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC024220.1-201ENST00000603675 484 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC079587.1-201ENST00000603846 277 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 CYP2C61P-201ENST00000604072 290 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AL354984.3-201ENST00000604803 325 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AL591034.3-201ENST00000605511 685 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AL138880.2-201ENST00000616214 239 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 MIR3653-201ENST00000625572 110 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 RNA5SP196-201ENST00000625967 102 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 U4.7-201ENST00000638126 106 ntBASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM55Q9BYV6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNU6-428P-201ENST00000362942 107 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNU6-1317P-201ENST00000364582 104 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNA5SP366-201ENST00000365454 123 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNU6-474P-201ENST00000384243 107 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNU6-933P-201ENST00000384424 107 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNU1-13P-201ENST00000384499 162 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNA5SP317-201ENST00000410176 116 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNA5SP311-201ENST00000411290 116 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 BPY2DP-201ENST00000422208 265 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC006946.1-201ENST00000429106 328 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AK3P2-201ENST00000507976 429 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNU6-377P-201ENST00000515965 102 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNA5SP315-201ENST00000516340 116 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 RNA5SP312-201ENST00000517068 116 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AP003730.1-201ENST00000524605 285 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC091516.1-201ENST00000549191 703 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 NACAP3-201ENST00000552100 481 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 CPDP1-201ENST00000579660 283 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 HMGN2P15-201ENST00000585707 270 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AL451007.1-201ENST00000595491 289 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 MIR486-1-201ENST00000612171 68 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AL136164.4-201ENST00000625013 2135 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC010300.1-201ENST00000600671 5134 ntBASIC4.17□□□□□ -1.74
TRIM55Q9BYV6 AC110491.1-201ENST00000562191 2010 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 OR5P1P-201ENST00000299512 925 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 RPL9P7-201ENST00000330965 580 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 RNA5SP295-201ENST00000362655 121 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 Y_RNA.128-201ENST00000363391 112 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 Y_RNA.132-201ENST00000363421 102 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 RNU1-132P-201ENST00000364300 164 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 RNU6-890P-201ENST00000384121 107 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 RNU6-842P-201ENST00000384269 107 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 MIR23B-201ENST00000384832 97 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 MIR548P-201ENST00000408336 84 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 AC087650.1-201ENST00000431445 468 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 AL513043.1-201ENST00000439124 535 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 RPL9P9-202ENST00000466501 579 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 NDUFB4P9-201ENST00000511646 388 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 AC109446.1-201ENST00000566172 220 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms