Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 RPS3AP46-201ENST00000448352 682 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 SSXP4-201ENST00000451349 245 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AC092798.1-201ENST00000458542 409 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 RPL7P43-201ENST00000478876 753 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AC026402.1-201ENST00000513642 170 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.682-201ENST00000516457 100 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 RNU1-103P-201ENST00000516502 125 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 RNU6-1332P-201ENST00000516666 104 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 MIR3672-201ENST00000584290 82 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AC023043.2-201ENST00000589678 1026 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 FAM157A-202ENST00000615155 405 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AC068831.7-201ENST00000616954 363 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AL133216.2-202ENST00000634512 349 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 MIR1302-1-201ENST00000637932 143 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TRIM54Q9BYV2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
TRIM54Q9BYV2 Y_RNA.11-201ENST00000362375 109 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 RNU6-884P-201ENST00000363889 107 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 RNU6-166P-201ENST00000384371 107 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 RNU6-658P-201ENST00000384606 106 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AL356057.2-201ENST00000403318 432 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 U3.39-201ENST00000408569 239 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AL592148.1-201ENST00000413568 445 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AL353729.1-201ENST00000425044 720 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 HMGB1P9-201ENST00000429856 646 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AL359672.1-201ENST00000442302 409 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 RNU6-566P-201ENST00000516790 107 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AC025423.5-201ENST00000550230 219 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 TGIF1P1-201ENST00000558095 802 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 H3F3AP1-201ENST00000559984 334 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 HSPE1P7-201ENST00000604681 321 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 PLCE1P1-201ENST00000622094 305 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AC034229.5-201ENST00000624258 185 ntBASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM54Q9BYV2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 Y_RNA.212-201ENST00000364177 102 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 RN7SKP280-201ENST00000364196 304 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 RNA5SP42-201ENST00000364278 115 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 RNU1-73P-201ENST00000383971 164 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC099548.1-201ENST00000421443 426 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 RPL23AP82-202ENST00000427528 469 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 SNAP23P1-201ENST00000433229 246 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC107399.1-201ENST00000451226 265 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 MTATP6P7-201ENST00000453315 681 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC104472.2-201ENST00000469035 601 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC128713.1-201ENST00000471495 306 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 RNU6-1088P-201ENST00000516850 104 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 MIR4790-201ENST00000577799 79 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC138761.3-201ENST00000579993 334 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 OR1M4P-201ENST00000589199 287 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 RNU6-85P-201ENST00000605989 107 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AL138726.1-201ENST00000614873 333 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 ATP5A1P2-202ENST00000616464 443 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC006111.3-201ENST00000622137 383 ntBASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms