Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.84□□□□□ -1.79
SALL3Q9BXA9 RN7SL863P-201ENST00000462370 296 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 RN7SL601P-201ENST00000471221 293 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AC083904.1-201ENST00000487828 231 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.84□□□□□ -1.79
SALL3Q9BXA9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.84□□□□□ -1.79
SALL3Q9BXA9 RNU6-27P-201ENST00000516146 107 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 RNU6-1088P-201ENST00000516850 104 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 RNU6-798P-201ENST00000516912 103 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 RNU6-1092P-201ENST00000516955 87 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AC022634.1-201ENST00000520765 532 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AC068657.1-201ENST00000520807 306 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AC109635.4-202ENST00000531666 412 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AL133271.1-201ENST00000538229 291 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.84□□□□□ -1.79
SALL3Q9BXA9 IMMP1LP2-201ENST00000552954 492 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 SNRPGP18-201ENST00000553000 214 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 MIR5680-201ENST00000577577 84 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 MIR5004-201ENST00000579078 107 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 MIR5690-201ENST00000583739 73 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 MIR3942-201ENST00000585264 109 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AC016925.2-201ENST00000605108 242 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 MIR8058-201ENST00000615737 89 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AC025034.2-201ENST00000623264 286 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 AL359757.2-201ENST00000624309 274 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 EXOC5P1-201ENST00000510543 1969 ntBASIC3.84□□□□□ -1.79
SALL3Q9BXA9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SALL3Q9BXA9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.84□□□□□ -1.8
SALL3Q9BXA9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.8
SALL3Q9BXA9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.84□□□□□ -1.8
SALL3Q9BXA9 AL137003.2-201ENST00000606924 2538 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 RNU6-254P-201ENST00000363377 107 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 SNORA24.1-201ENST00000384401 135 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 RNU2-37P-201ENST00000410695 177 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AC245054.2-201ENST00000415639 319 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 CALM2P2-201ENST00000428512 440 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AC135721.1-201ENST00000497954 479 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 CCDC34P1-201ENST00000507441 517 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 MTCO3P44-201ENST00000510977 541 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 RNA5SP454-201ENST00000517231 127 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 IGKV2D-23-201ENST00000518179 286 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 APOOP3-201ENST00000536787 586 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 OR11H5P-201ENST00000554039 926 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 XIAPP1-201ENST00000603162 600 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AC124312.5-201ENST00000604451 268 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 uc_338.22-201ENST00000622722 187 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AC018692.3-201ENST00000623929 123 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AC048347.1-201ENST00000624621 427 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AL136313.1-201ENST00000624804 202 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 AC138305.3-201ENST00000624988 240 ntBASIC3.83□□□□□ -1.8
SALL3Q9BXA9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SALL3Q9BXA9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 Y_RNA.28-201ENST00000362554 111 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 Y_RNA.112-201ENST00000363250 102 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 Y_RNA.133-201ENST00000363428 110 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 RNU6-432P-201ENST00000384196 109 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 EIF4E2P1-201ENST00000393781 255 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AL360182.1-201ENST00000397433 468 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AL109755.1-201ENST00000401791 649 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AL139397.2-201ENST00000404529 772 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AL583834.1-201ENST00000406943 343 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 RNU4-47P-201ENST00000410876 114 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AC114491.1-201ENST00000416095 246 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 ATG3P1-201ENST00000419507 911 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 RPL7P46-201ENST00000425129 740 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AL137792.2-201ENST00000443484 235 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 ELOCP24-201ENST00000456370 334 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AL162395.1-201ENST00000457882 422 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 RPS29P2-201ENST00000479278 136 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AC079140.5-201ENST00000507882 310 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 AC098591.2-201ENST00000510152 315 ntBASIC3.82□□□□□ -1.8
SALL3Q9BXA9 DEFB108D-201ENST00000527787 222 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms