Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SNORA70.2-201ENST00000364506 135 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 MIR613-201ENST00000385248 95 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 SNORA12.2-201ENST00000391040 156 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 TOMM20P4-201ENST00000427861 435 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 GEMIN8P3-201ENST00000445417 720 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 RPL37P6-202ENST00000464216 403 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 AC108022.1-201ENST00000493466 478 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 RN7SKP122-201ENST00000515923 296 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 RNU6-861P-201ENST00000516745 106 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 Y_RNA.706-201ENST00000516933 99 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 SNORA31.22-201ENST00000517204 135 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 PARP1P2-201ENST00000556806 195 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 AC079587.1-201ENST00000603846 277 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 SNX18P1Y-201ENST00000616231 511 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 AC140479.6-201ENST00000633535 357 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 BMS1P21-201ENST00000634565 365 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 AL359854.1-201ENST00000614203 1594 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 AC007785.2-201ENST00000598627 1916 ntBASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
SSBP3Q9BWW4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP3Q9BWW4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 RNU6-682P-201ENST00000363843 106 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 SNORD50B-201ENST00000364995 70 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 RNU6-882P-201ENST00000391025 103 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 RPL23AP48-201ENST00000406913 488 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 SNORA11F-201ENST00000408237 128 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 SNORD56-201ENST00000413522 71 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC091390.1-201ENST00000433904 331 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC087588.1-201ENST00000462203 316 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 RN7SL41P-201ENST00000476144 297 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 RNU7-175P-201ENST00000515915 61 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 RN7SKP234-201ENST00000517173 224 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 BNIP3P5-201ENST00000562290 498 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC104581.2-201ENST00000572227 430 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 MIR6716-201ENST00000613413 80 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC114781.5-201ENST00000615297 108 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC097372.5-201ENST00000623665 376 ntBASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP3Q9BWW4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 MIR412-201ENST00000362142 91 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 MIR331-201ENST00000362302 94 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 RNU6-858P-201ENST00000362436 107 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 RNU6-512P-201ENST00000364438 103 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.405-201ENST00000383979 100 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.451-201ENST00000384200 100 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.524-201ENST00000384564 100 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.561-201ENST00000384694 100 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 RNU6-837P-201ENST00000391056 108 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 RNU2-20P-201ENST00000410425 191 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AL513331.1-201ENST00000411908 397 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms