Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AL670379.3-201ENST00000605040 251 ntBASIC4.04□□□□□ -1.76
SSBP4Q9BWG4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.04□□□□□ -1.76
SSBP4Q9BWG4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.04□□□□□ -1.76
SSBP4Q9BWG4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.04□□□□□ -1.76
SSBP4Q9BWG4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP4Q9BWG4 AC008555.8-201ENST00000623602 2168 ntBASIC4.04□□□□□ -1.76
SSBP4Q9BWG4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP4Q9BWG4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SSBP4Q9BWG4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RNU6-969P-201ENST00000383900 105 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RNU6-178P-201ENST00000384631 104 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 SNORA66-201ENST00000384792 133 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 MIR551B-201ENST00000384984 96 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 MIR708-201ENST00000390708 88 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 SNORA75.5-201ENST00000391291 81 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AC096649.2-201ENST00000416186 393 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 YPEL5P1-201ENST00000419731 367 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 GAPDHP59-201ENST00000435908 267 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RPL36AP39-201ENST00000445859 318 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RPL7AP28-201ENST00000464513 571 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RN7SL741P-201ENST00000482473 289 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RPS29P24-201ENST00000486345 171 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RN7SL193P-201ENST00000491708 276 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RNA5SP441-201ENST00000516809 88 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 IGLV3-30-201ENST00000524362 298 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 BNIP3P1-201ENST00000547295 580 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AC021231.3-201ENST00000558497 370 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AC092266.1-201ENST00000610958 165 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 MIR6823-201ENST00000622118 61 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 AC026951.1-201ENST00000559530 2459 ntBASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.03□□□□□ -1.76
SSBP4Q9BWG4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SSBP4Q9BWG4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 SNORD56.1-201ENST00000362913 68 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 RNU6-1285P-201ENST00000363480 105 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 Y_RNA.251-201ENST00000364551 99 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 Y_RNA.294-201ENST00000364916 102 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 RNU6-728P-201ENST00000365375 104 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 SNORA36A-201ENST00000384221 132 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 SNORD116-21-201ENST00000384507 92 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 SNORA40.5-201ENST00000391061 128 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AL355497.1-201ENST00000406262 551 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 RPS20P14-201ENST00000412545 360 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AIMP1P2-201ENST00000425294 312 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 OR2AH1P-201ENST00000425717 928 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 PNKDP1-201ENST00000435914 430 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AL714022.1-201ENST00000439897 151 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 Y_RNA.651-201ENST00000459380 103 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC098847.1-201ENST00000473094 348 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC090142.3-201ENST00000519012 385 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 LINC00933-203ENST00000559812 219 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 OR1E3-201ENST00000575608 948 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC053481.4-201ENST00000583164 216 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AC019159.1-201ENST00000605094 187 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 AL445567.2-201ENST00000618935 498 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP4Q9BWG4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms