Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 RMST_9.1-201ENST00000619945 193 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRFN3Q9BTN0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.84□□□□□ -1.8
LRFN3Q9BTN0 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.8
LRFN3Q9BTN0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRFN3Q9BTN0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNA5SP502-201ENST00000362694 119 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 Y_RNA.167-201ENST00000363735 109 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNU6-434P-201ENST00000384376 107 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 MIR568-201ENST00000385036 95 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AL139397.2-201ENST00000404529 772 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNU6-370P-201ENST00000411008 104 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 BX323014.1-201ENST00000412876 237 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC074085.1-201ENST00000413598 418 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC092047.1-201ENST00000424997 240 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AL512844.2-201ENST00000433990 593 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC107399.1-201ENST00000451226 265 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 HMGB3P22-202ENST00000451823 572 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AL135752.1-201ENST00000479477 471 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 YWHAEP4-201ENST00000505390 198 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 PTP4A1P4-201ENST00000512479 322 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNU6-1038P-201ENST00000516516 104 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNU6-273P-201ENST00000516937 96 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNA5SP471-201ENST00000516971 106 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNU6-1137P-201ENST00000517073 99 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RNU6-988P-201ENST00000519081 107 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 SYF2P1-201ENST00000550658 413 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 RPL21P7-201ENST00000557463 483 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 BNIP3P25-201ENST00000596023 559 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AP000654.2-201ENST00000605633 586 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 Z82243.1-201ENST00000609432 473 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC090425.1-201ENST00000610007 140 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 AC012531.5-201ENST00000611375 151 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 uc_338.32-201ENST00000615087 172 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 EOGT-210ENST00000615922 1931 ntBASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRFN3Q9BTN0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 MTND4P1-201ENST00000457501 1466 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 SNORD9-201ENST00000362566 104 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 Y_RNA.378-201ENST00000365652 113 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 Y_RNA.401-201ENST00000383965 117 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 HDGFP1-201ENST00000405943 252 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 RN7SKP158-201ENST00000410453 326 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 RPL37P10-201ENST00000412884 288 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 RPL7P10-201ENST00000417407 739 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 RBMY1KP-201ENST00000423480 476 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AL592045.1-201ENST00000429867 352 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 SNORA71B-202ENST00000439232 272 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 MRPS31P2-201ENST00000451581 518 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 FABP5P15-201ENST00000453566 214 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 SCARNA18-201ENST00000459004 134 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 RNU6-1208P-201ENST00000459588 107 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 SMURF2P1-201ENST00000514992 481 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AC087369.1-201ENST00000520775 996 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AP000889.2-201ENST00000532684 490 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 HMGB1P14-201ENST00000557424 591 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 MIR1273C-201ENST00000578669 77 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AC025946.2-201ENST00000603398 234 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 7SK.7-201ENST00000603504 247 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AC007938.3-201ENST00000604965 623 ntBASIC3.82□□□□□ -1.8
LRFN3Q9BTN0 AC092807.2-201ENST00000609367 243 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms