Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC008745.1-201ENST00000604064 271 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AL160290.3-201ENST00000604869 165 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AL161629.2-201ENST00000615347 275 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 MIR376A1-201ENST00000616574 68 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 SNORD50.1-201ENST00000362987 71 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 RNU1-32P-201ENST00000363937 159 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.270-201ENST00000364693 104 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 RNU6-708P-201ENST00000384217 107 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.462-201ENST00000384268 102 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.539-201ENST00000384635 107 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 MIR190B-201ENST00000401119 79 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 RPS16P5-201ENST00000406501 404 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 RN7SKP267-201ENST00000410381 285 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 RN7SKP106-201ENST00000410832 272 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AP000275.1-201ENST00000411943 390 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 BX510359.2-201ENST00000417920 305 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 RPL23AP25-201ENST00000430973 463 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AC091286.1-201ENST00000431233 461 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AL591043.1-201ENST00000432461 424 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AC091390.1-201ENST00000433904 331 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AC087190.1-201ENST00000484462 480 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AC107032.1-201ENST00000485945 480 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 RPS23P5-201ENST00000495419 428 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 MIR2355-201ENST00000517199 87 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AC103996.1-201ENST00000555468 102 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AC053481.4-201ENST00000583164 216 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 RPL7P50-201ENST00000600588 727 ntBASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM56Q9BRZ2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC010300.1-201ENST00000600671 5134 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 RNU1-108P-201ENST00000362556 161 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 RNY1-201ENST00000364228 113 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 MIR10A-201ENST00000385043 110 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 Z98745.1-201ENST00000402553 494 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 RPL21P66-201ENST00000426566 466 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 MTND3P9-201ENST00000429526 346 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AL358472.1-201ENST00000431295 329 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC104332.1-201ENST00000440471 797 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 RPL23AP93-201ENST00000440847 484 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 PIGFP3-201ENST00000441918 722 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AL078601.1-201ENST00000444542 271 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC013470.1-201ENST00000453438 462 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC079354.2-201ENST00000453523 154 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 ANP32BP2-201ENST00000454525 545 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 RN7SL481P-201ENST00000477764 299 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 KC877373.1-201ENST00000479066 408 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC098869.1-201ENST00000481627 292 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 RNA5SP360-201ENST00000516555 118 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 SNORA31.19-201ENST00000517079 126 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC130289.1-201ENST00000577321 73 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 MIR5096-201ENST00000583713 70 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 SRGNP1-201ENST00000603392 451 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AL139395.1-201ENST00000603662 160 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 BX284668.6-201ENST00000606899 438 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC022336.2-201ENST00000568966 2538 ntBASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM56Q9BRZ2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 RLIMP1-201ENST00000339626 1680 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 RNU1-35P-201ENST00000362782 153 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 RNA5SP505-201ENST00000364748 108 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 RNA5SP189-201ENST00000364920 115 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.297-201ENST00000364950 91 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 RNU6-166P-201ENST00000384371 107 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 SNORD115-46-201ENST00000390982 71 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 SNORD58.1-201ENST00000391313 66 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 MRPL35P1-201ENST00000404272 572 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AC098614.2-201ENST00000426040 255 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AL392103.1-201ENST00000447000 198 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms