Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN18Q99952 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN18Q99952 GSTA11P-201ENST00000452866 669 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 SNORD5.1-201ENST00000458800 75 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN18Q99952 AC010631.1-201ENST00000474150 156 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN18Q99952 IGKV2-26-201ENST00000518305 343 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN18Q99952 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN18Q99952 AL109918.3-201ENST00000603072 338 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN18Q99952 AC100812.1-201ENST00000607622 580 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 AC009229.3-201ENST00000608056 282 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 U2.17-201ENST00000611454 95 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 AL589994.2-201ENST00000621124 579 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 U4.6-201ENST00000621618 127 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 AL353748.2-201ENST00000622148 471 ntBASIC4.15□□□□□ -1.75
PTPN18Q99952 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PTPN18Q99952 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN18Q99952 XIAPP3-201ENST00000312918 795 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN18Q99952 U3.19-201ENST00000390893 196 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 SNORA16.2-201ENST00000390991 127 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 Y_RNA.594-201ENST00000410373 140 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 Z75741.1-201ENST00000446793 314 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC108860.1-201ENST00000484521 383 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC078918.1-201ENST00000498515 228 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN18Q99952 AC023141.12-201ENST00000512399 199 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC104136.1-201ENST00000512969 394 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 Y_RNA.661-201ENST00000516003 99 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 RNU6-699P-201ENST00000517081 110 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN18Q99952 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN18Q99952 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN18Q99952 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN18Q99952 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN18Q99952 MIR5680-201ENST00000577577 84 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC174048.1-201ENST00000603389 144 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AL138889.2-201ENST00000603883 242 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC018889.1-201ENST00000605372 397 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC062037.2-201ENST00000610137 73 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 SDR42E1P2-201ENST00000614861 481 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AL360181.4-201ENST00000621752 134 ntBASIC4.14□□□□□ -1.75
PTPN18Q99952 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN18Q99952 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN18Q99952 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN18Q99952 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PTPN18Q99952 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN18Q99952 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 Y_RNA.428-201ENST00000384078 102 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 SNORD70.1-201ENST00000391007 85 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 NDUFS5P1-201ENST00000405668 289 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 HDGFP1-201ENST00000405943 252 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 RNA5SP239-201ENST00000410218 129 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN18Q99952 RPL7P37-201ENST00000425095 738 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN18Q99952 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN18Q99952 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN18Q99952 RPS24P6-201ENST00000452670 400 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN18Q99952 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN18Q99952 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
PTPN18Q99952 AC078817.1-201ENST00000492623 435 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 AC026801.1-201ENST00000497178 464 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 RPL23AP55-201ENST00000498163 452 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 RBBP4P6-201ENST00000508098 202 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 SNORD116.3-201ENST00000517176 78 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 RNU1-54P-201ENST00000517181 120 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPN18Q99952 LARP7P3-201ENST00000579888 337 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN18Q99952 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPN18Q99952 AL732372.2-225ENST00000642124 456 ntBASIC4.13□□□□□ -1.75
PTPN18Q99952 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPN18Q99952 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PTPN18Q99952 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPN18Q99952 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PTPN18Q99952 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms