Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AL358453.1-201ENST00000422522 250 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AC098614.2-201ENST00000426040 255 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.99□□□□□ -2.09
CDX2Q99626 MTND3P1-201ENST00000441336 220 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 MTATP6P30-201ENST00000443540 664 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.99□□□□□ -2.09
CDX2Q99626 AC020550.1-201ENST00000447385 163 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX2Q99626 RNU7-26P-201ENST00000458980 63 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AC034222.1-201ENST00000494052 532 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 EIF4EP3-201ENST00000498782 656 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.99□□□□□ -2.09
CDX2Q99626 SUMO2P6-201ENST00000505273 288 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AC022634.1-201ENST00000520765 532 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AP000889.2-201ENST00000532684 490 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CDX2Q99626 GLYCAM1-201ENST00000546596 285 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AL133153.1-201ENST00000557756 303 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.99□□□□□ -2.09
CDX2Q99626 AC234772.3-201ENST00000602277 528 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AC068790.3-201ENST00000602988 553 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AC097478.2-201ENST00000610572 514 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AC004852.3-201ENST00000614131 326 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 HMGB1P24-202ENST00000615653 685 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.99□□□□□ -2.09
CDX2Q99626 MIR3199-2-201ENST00000636243 86 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDX2Q99626 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDX2Q99626 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDX2Q99626 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CDX2Q99626 RNU6-853P-201ENST00000364306 107 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 SNORA68.1-201ENST00000364537 132 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 RNU6-157P-201ENST00000383957 107 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX2Q99626 RNU6-757P-201ENST00000410334 100 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 RNU4-72P-201ENST00000410754 173 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC023141.4-201ENST00000412031 328 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.98□□□□□ -2.09
CDX2Q99626 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX2Q99626 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX2Q99626 AC083875.1-201ENST00000419509 405 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 MTCO2P21-201ENST00000419780 677 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX2Q99626 ZNF863P-201ENST00000426746 417 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX2Q99626 MTND1P32-201ENST00000433043 938 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 UBE2V1P13-201ENST00000436983 439 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX2Q99626 RPS4XP11-201ENST00000446897 772 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC009474.2-201ENST00000451383 136 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 MTND2P24-201ENST00000453434 806 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX2Q99626 RNU1-123P-201ENST00000458950 160 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC007182.2-201ENST00000489251 402 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX2Q99626 AC114786.4-201ENST00000508771 728 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC114797.1-201ENST00000514003 728 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX2Q99626 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX2Q99626 AP005660.1-201ENST00000522972 293 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.98□□□□□ -2.09
CDX2Q99626 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.98□□□□□ -2.09
CDX2Q99626 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX2Q99626 AC121758.2-201ENST00000553271 193 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 DUXAP1-201ENST00000556632 463 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC087465.1-201ENST00000560574 245 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC060771.1-201ENST00000582031 164 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 HMGN2P15-201ENST00000585707 270 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX2Q99626 RPS15AP11-201ENST00000594193 385 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 SDR42E1P2-201ENST00000614861 481 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AC245884.12-201ENST00000615364 59 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 AP000676.3-201ENST00000623299 569 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 U2.21-201ENST00000637295 81 ntBASIC1.98□□□□□ -2.09
CDX2Q99626 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CDX2Q99626 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDX2Q99626 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDX2Q99626 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.97□□□□□ -2.09
CDX2Q99626 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX2Q99626 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDX2Q99626 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CDX2Q99626 RNU6-931P-201ENST00000363850 107 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CDX2Q99626 RNU6-432P-201ENST00000384196 109 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 RNU6-769P-201ENST00000384407 104 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 RNU6-140P-201ENST00000384566 108 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 MIR767-201ENST00000390228 109 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 MIR888-201ENST00000401186 77 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 TXNP7-201ENST00000406296 293 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 MIR1305-201ENST00000408300 86 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 RNU2-20P-201ENST00000410425 191 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 AF274854.1-201ENST00000413236 615 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 POLR2J4-204ENST00000418424 324 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.97□□□□□ -2.09
CDX2Q99626 MTCO3P30-201ENST00000426425 670 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 RPL7P34-201ENST00000433316 712 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 LARP1BP3-201ENST00000437229 869 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms