Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.76□□□□□ -1.97
CDCA3Q99618 AC099548.1-201ENST00000421443 426 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.76□□□□□ -1.97
CDCA3Q99618 MTCO2P11-201ENST00000431069 680 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 GPM6BP2-201ENST00000432046 144 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 MTATP6P16-201ENST00000434543 526 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.76□□□□□ -1.97
CDCA3Q99618 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.76□□□□□ -1.97
CDCA3Q99618 GPM6BP1-201ENST00000446387 144 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.76□□□□□ -1.97
CDCA3Q99618 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.76□□□□□ -1.97
CDCA3Q99618 AC023194.1-201ENST00000493084 308 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 RPS29P21-201ENST00000496272 170 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.76□□□□□ -1.97
CDCA3Q99618 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CDCA3Q99618 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.76□□□□□ -1.97
CDCA3Q99618 RNU6-677P-201ENST00000516914 101 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 RNU6-410P-201ENST00000517006 107 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.76□□□□□ -1.97
CDCA3Q99618 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.76□□□□□ -1.97
CDCA3Q99618 AC004223.2-201ENST00000590309 544 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AC174048.1-201ENST00000603389 144 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 BNIP3P9-201ENST00000603714 553 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AL158032.1-201ENST00000605401 106 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AC069234.5-201ENST00000611056 416 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CDCA3Q99618 AC136475.10-201ENST00000620253 385 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 AC073308.1-201ENST00000623696 305 ntBASIC2.76□□□□□ -1.97
CDCA3Q99618 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CDCA3Q99618 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CDCA3Q99618 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CDCA3Q99618 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDCA3Q99618 MTND5P29-201ENST00000458676 1807 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.75□□□□□ -1.97
CDCA3Q99618 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
CDCA3Q99618 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.75□□□□□ -1.97
CDCA3Q99618 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDCA3Q99618 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.75□□□□□ -1.97
CDCA3Q99618 RNU6-1097P-201ENST00000363586 107 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 SNORA14A-201ENST00000364773 135 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 Y_RNA.296-201ENST00000364930 108 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 RNU6-108P-201ENST00000365558 107 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 RNU6-259P-201ENST00000383999 107 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 Y_RNA.517-201ENST00000384551 106 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 RPL21P75-201ENST00000396599 483 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 RPL21P28-201ENST00000401418 483 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AL592114.1-201ENST00000403842 483 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 GSTA9P-201ENST00000406231 611 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.75□□□□□ -1.97
CDCA3Q99618 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.75□□□□□ -1.97
CDCA3Q99618 Z98742.3-201ENST00000418637 326 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.75□□□□□ -1.97
CDCA3Q99618 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.75□□□□□ -1.97
CDCA3Q99618 AL591212.2-201ENST00000433923 257 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.75□□□□□ -1.97
CDCA3Q99618 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC079781.2-201ENST00000446424 169 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 RPL21P39-201ENST00000463605 483 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 RPL21P93-201ENST00000480465 489 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC233702.1-201ENST00000482905 502 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC087190.1-201ENST00000484462 480 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC093591.1-201ENST00000491435 481 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 RPL21P16-201ENST00000495531 483 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC116562.3-201ENST00000506136 177 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC108078.2-201ENST00000510750 236 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 SNORA9.3-201ENST00000516383 129 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 RNA5SP165-201ENST00000517142 115 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC068587.5-201ENST00000528506 175 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.75□□□□□ -1.97
CDCA3Q99618 SUB1P2-201ENST00000556401 297 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.75□□□□□ -1.97
CDCA3Q99618 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.75□□□□□ -1.97
CDCA3Q99618 AC024619.4-201ENST00000580924 316 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC022893.3-201ENST00000607665 437 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDCA3Q99618 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC138649.3-201ENST00000622154 254 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 AC139792.2-201ENST00000624218 587 ntBASIC2.75□□□□□ -1.97
CDCA3Q99618 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.75□□□□□ -1.97
CDCA3Q99618 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.75□□□□□ -1.97
CDCA3Q99618 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.75□□□□□ -1.97
CDCA3Q99618 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.75□□□□□ -1.97
CDCA3Q99618 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CDCA3Q99618 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDCA3Q99618 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDCA3Q99618 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CDCA3Q99618 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CDCA3Q99618 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CDCA3Q99618 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CDCA3Q99618 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.74□□□□□ -1.97
CDCA3Q99618 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.74□□□□□ -1.97
CDCA3Q99618 RNU6-74P-201ENST00000384235 107 ntBASIC2.74□□□□□ -1.97
CDCA3Q99618 RNU6-198P-201ENST00000384258 104 ntBASIC2.74□□□□□ -1.97
CDCA3Q99618 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.74□□□□□ -1.97
CDCA3Q99618 ISCA1P1-201ENST00000426679 387 ntBASIC2.74□□□□□ -1.97
CDCA3Q99618 AC010975.2-201ENST00000427781 588 ntBASIC2.74□□□□□ -1.97
CDCA3Q99618 AL592045.1-201ENST00000429867 352 ntBASIC2.74□□□□□ -1.97
CDCA3Q99618 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.74□□□□□ -1.97
CDCA3Q99618 SNRPEP9-201ENST00000436794 238 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms