Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL445669.1-201ENST00000426743 755 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 HMGN2P3-201ENST00000433603 273 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 HMGN2P5-201ENST00000436882 273 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.7□□□□□ -2.14
VAT1Q99536 AC009238.1-201ENST00000442165 424 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 AC009237.6-201ENST00000446969 424 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 AL136380.1-201ENST00000447970 162 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 AL513124.1-201ENST00000450410 614 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
VAT1Q99536 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.7□□□□□ -2.14
VAT1Q99536 AC018437.1-201ENST00000492214 406 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VAT1Q99536 AC091163.3-201ENST00000518269 1144 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VAT1Q99536 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.7□□□□□ -2.14
VAT1Q99536 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.7□□□□□ -2.14
VAT1Q99536 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.7□□□□□ -2.14
VAT1Q99536 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VAT1Q99536 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.7□□□□□ -2.14
VAT1Q99536 AL596327.1-201ENST00000603629 213 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 MIR6134-201ENST00000617606 109 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 AC013470.4-201ENST00000619978 986 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VAT1Q99536 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
VAT1Q99536 AC002543.1-201ENST00000299783 1954 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AL356292.1-201ENST00000283110 373 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VAT1Q99536 RNU6-1159P-201ENST00000362933 107 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 Y_RNA.192-201ENST00000363977 102 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 RNU6-14P-201ENST00000384630 106 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC119751.3-201ENST00000399720 670 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.69□□□□□ -2.14
VAT1Q99536 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.69□□□□□ -2.14
VAT1Q99536 RPL31P63-201ENST00000422565 375 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AL160275.3-201ENST00000423876 471 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC096920.1-201ENST00000423991 241 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 HMGB1P27-201ENST00000431429 603 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AL117351.1-201ENST00000438864 766 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.69□□□□□ -2.14
VAT1Q99536 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.69□□□□□ -2.14
VAT1Q99536 AL441985.1-201ENST00000457727 251 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 PMCHL2-203ENST00000457791 237 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC112771.1-201ENST00000463581 102 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC055855.1-201ENST00000489563 579 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.69□□□□□ -2.14
VAT1Q99536 RPL23AP63-201ENST00000498752 471 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 HMGB3P17-201ENST00000504195 649 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC116655.1-201ENST00000508324 901 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC107953.1-201ENST00000522216 297 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AP006587.4-201ENST00000526053 529 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.69□□□□□ -2.14
VAT1Q99536 AP005435.4-201ENST00000529514 284 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AP000873.5-201ENST00000533906 236 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AK6P1-201ENST00000540219 478 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC079598.5-201ENST00000547460 117 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC009712.1-201ENST00000564938 316 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC022662.1-201ENST00000580252 331 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC078899.2-201ENST00000595282 212 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VAT1Q99536 AC006386.1-201ENST00000619436 415 ntBASIC1.69□□□□□ -2.14
VAT1Q99536 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.68□□□□□ -2.14
VAT1Q99536 RNA5SP276-201ENST00000362580 94 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 RNU6-462P-201ENST00000362659 105 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 RNU6-1284P-201ENST00000363701 100 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 RNA5SP240-201ENST00000365355 128 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 SNORD116.1-201ENST00000365628 92 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 HMGN2P39-201ENST00000398005 273 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AL136310.1-201ENST00000404926 654 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 NDUFS5P1-201ENST00000405668 289 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.68□□□□□ -2.14
VAT1Q99536 AC083875.1-201ENST00000419509 405 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.68□□□□□ -2.14
VAT1Q99536 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.68□□□□□ -2.14
VAT1Q99536 OOSP1P1-201ENST00000423265 274 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AIMP1P2-201ENST00000425294 312 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.68□□□□□ -2.14
VAT1Q99536 RPL7P34-201ENST00000433316 712 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 RPS15AP9-201ENST00000439856 381 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AL161788.1-201ENST00000441805 169 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 BRK1P2-201ENST00000442875 223 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AC007677.1-201ENST00000445757 515 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.68□□□□□ -2.14
VAT1Q99536 RPL23AP3-201ENST00000453844 468 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 MTCO1P42-201ENST00000457379 726 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.68□□□□□ -2.14
VAT1Q99536 AC140059.1-201ENST00000489238 361 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 CKS1BP2-201ENST00000497342 240 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AC116353.3-201ENST00000511215 249 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
VAT1Q99536 RNA5SP137-201ENST00000516833 135 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 ACA59.2-201ENST00000517061 156 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.68□□□□□ -2.14
VAT1Q99536 AC010376.1-201ENST00000522101 334 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 CBX3P4-201ENST00000538909 354 ntBASIC1.68□□□□□ -2.14
VAT1Q99536 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.68□□□□□ -2.14
VAT1Q99536 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.68□□□□□ -2.14
VAT1Q99536 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.68□□□□□ -2.14
VAT1Q99536 MIR4287-201ENST00000579398 78 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms